Strain Fitness in Agrobacterium fabrum C58 around Atu2589

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
2,565,121	+				+1.3
2,565,344	+		Atu2588	0.29	+0.2
2,565,368	+		Atu2588	0.31	-0.9
2,565,368	+		Atu2588	0.31	+1.9
2,565,376	-		Atu2588	0.32	+0.8
2,565,399	+		Atu2588	0.34	-0.8
2,565,438	+		Atu2588	0.38	+1.0
2,565,448	-		Atu2588	0.39	+1.9
2,565,469	+		Atu2588	0.41	+3.2
2,565,474	+		Atu2588	0.42	+3.1
2,565,596	+		Atu2588	0.54	+4.0
2,565,634	+		Atu2588	0.58	+2.0
2,565,762	+		Atu2588	0.71	+1.4
2,565,770	-		Atu2588	0.71	+1.6
2,565,770	-		Atu2588	0.71	+1.6
2,565,770	-		Atu2588	0.71	+0.6
2,565,770	-		Atu2588	0.71	+1.1
2,565,838	-		Atu2588	0.78	+1.5
2,565,955	-				+0.6
2,565,981	+				+2.3
2,565,988	+				+2.5
2,566,038	-				-1.3
2,566,081	+				+0.7
2,566,245	-		Atu2589	0.16	+1.8
2,566,263	-		Atu2589	0.18	+0.9
2,566,263	-		Atu2589	0.18	+1.8
2,566,432	-		Atu2589	0.32	+1.7
2,566,605	+		Atu2589	0.47	+1.6
2,566,636	+		Atu2589	0.50	+2.2
2,566,694	+		Atu2589	0.55	+3.5
2,566,694	+		Atu2589	0.55	+1.1
2,566,694	+		Atu2589	0.55	+0.7
2,566,694	+		Atu2589	0.55	+1.2
2,566,694	+		Atu2589	0.55	+0.1
2,566,702	-		Atu2589	0.55	+2.8
2,566,757	+		Atu2589	0.60	+0.7
2,566,793	-		Atu2589	0.63	+1.3
2,566,828	-		Atu2589	0.66	+1.0
2,566,844	+		Atu2589	0.67	+1.8
2,566,852	-		Atu2589	0.68	+2.6
2,566,956	+		Atu2589	0.77	-0.1
2,566,988	-		Atu2589	0.80	+2.0
2,567,126	+				+1.5
2,567,199	+				+2.1
2,567,279	+				-2.3
2,567,329	+				-5.0
2,567,329	+				-3.4
2,567,337	-				-2.9
2,567,387	+				-4.2
2,567,397	+				+0.5
2,567,411	-				-3.5
2,567,501	+		Atu2590	0.17	-1.1
2,567,647	-		Atu2590	0.29	-4.7
2,567,647	-		Atu2590	0.29	-3.3
2,567,705	+		Atu2590	0.34	-1.3
2,567,713	-		Atu2590	0.34	-2.7
2,567,713	-		Atu2590	0.34	-3.9
2,567,740	-		Atu2590	0.36	-3.4
2,567,866	+		Atu2590	0.47	-4.1
2,567,916	+		Atu2590	0.51	-4.5
2,568,019	-		Atu2590	0.60	-4.2
2,568,180	-		Atu2590	0.73	-6.0