Strain Fitness in Agrobacterium fabrum C58 around Atu2587

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
2,562,188	+		Atu2586	0.49	-0.8
2,562,279	+		Atu2586	0.54	+1.3
2,562,280	-		Atu2586	0.54	+1.5
2,562,312	+		Atu2586	0.55	+1.5
2,562,365	-		Atu2586	0.58	+1.2
2,562,391	+		Atu2586	0.60	+1.7
2,562,399	-		Atu2586	0.60	+1.3
2,562,402	+		Atu2586	0.60	+2.1
2,562,402	+		Atu2586	0.60	+1.7
2,562,531	+		Atu2586	0.67	+1.6
2,562,539	-		Atu2586	0.67	+1.0
2,562,576	-		Atu2586	0.69	-0.7
2,562,621	+		Atu2586	0.72	-2.3
2,562,621	+		Atu2586	0.72	+1.6
2,562,845	+		Atu2586	0.84	+2.0
2,562,855	+		Atu2586	0.84	+1.6
2,562,855	+		Atu2586	0.84	+1.7
2,562,863	-		Atu2586	0.84	+1.5
2,562,873	-		Atu2586	0.85	+1.5
2,562,880	-		Atu2586	0.85	+2.0
2,563,052	-				+1.4
2,563,052	-				+0.1
2,563,052	-				+3.9
2,563,054	+				+0.8
2,563,227	-				+1.4
2,563,282	-				+0.9
2,563,328	+				-0.5
2,563,336	+				+1.7
2,563,469	+		Atu2587	0.17	+1.5
2,563,477	-		Atu2587	0.17	+2.3
2,563,507	-		Atu2587	0.19	+2.2
2,563,507	-		Atu2587	0.19	+1.9
2,563,507	-		Atu2587	0.19	+1.5
2,563,507	-		Atu2587	0.19	+1.5
2,563,524	-		Atu2587	0.20	+1.5
2,563,542	+		Atu2587	0.20	+1.3
2,563,677	+		Atu2587	0.28	+0.8
2,563,693	-		Atu2587	0.28	+1.0
2,563,728	+		Atu2587	0.30	+1.2
2,563,736	-		Atu2587	0.31	+1.7
2,563,847	-		Atu2587	0.36	+0.3
2,563,909	-		Atu2587	0.40	+2.0
2,563,909	-		Atu2587	0.40	+1.7
2,563,909	-		Atu2587	0.40	-0.1
2,563,961	+		Atu2587	0.42	+1.8
2,564,009	-		Atu2587	0.45	+1.5
2,564,179	-		Atu2587	0.54	+1.6
2,564,215	+		Atu2587	0.56	+3.1
2,564,218	-		Atu2587	0.56	-0.6
2,564,229	-		Atu2587	0.57	-1.1
2,564,397	-		Atu2587	0.65	+1.7
2,564,445	+		Atu2587	0.68	+1.8
2,564,485	+		Atu2587	0.70	+0.6
2,564,596	-		Atu2587	0.76	+2.1
2,564,643	-		Atu2587	0.78	+1.6
2,564,643	-		Atu2587	0.78	+1.5
2,564,643	-		Atu2587	0.78	+1.6
2,564,645	+		Atu2587	0.78	+2.4
2,564,669	-		Atu2587	0.80	+0.8
2,564,678	+		Atu2587	0.80	+2.3
2,564,686	-		Atu2587	0.81	+1.8
2,564,686	-		Atu2587	0.81	+0.2
2,564,727	+		Atu2587	0.83	+1.3
2,564,747	+		Atu2587	0.84	+1.9
2,564,755	-		Atu2587	0.84	+1.8
2,564,798	-		Atu2587	0.86	+1.5
2,564,924	-				+2.2
2,564,994	+				+1.5
2,565,121	+				+1.3
2,565,344	+		Atu2588	0.29	+0.2
2,565,368	+		Atu2588	0.31	-0.9
2,565,368	+		Atu2588	0.31	+1.9
2,565,376	-		Atu2588	0.32	+0.8
2,565,399	+		Atu2588	0.34	-0.8
2,565,438	+		Atu2588	0.38	+1.0
2,565,448	-		Atu2588	0.39	+1.9
2,565,469	+		Atu2588	0.41	+3.2
2,565,474	+		Atu2588	0.42	+3.1
2,565,596	+		Atu2588	0.54	+4.0
2,565,634	+		Atu2588	0.58	+2.0
2,565,762	+		Atu2588	0.71	+1.4
2,565,770	-		Atu2588	0.71	+1.6
2,565,770	-		Atu2588	0.71	+1.6
2,565,770	-		Atu2588	0.71	+0.6
2,565,770	-		Atu2588	0.71	+1.1
2,565,838	-		Atu2588	0.78	+1.5
2,565,955	-				+0.6
2,565,981	+				+2.3
2,565,988	+				+2.5
2,566,038	-				-1.3