Strain Fitness in Agrobacterium fabrum C58 around Atu2586

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
2,560,275	-		Atu2585	0.22	+1.5
2,560,386	+		Atu2585	0.35	-1.7
2,560,389	-		Atu2585	0.35	-1.1
2,560,391	+		Atu2585	0.36	-2.0
2,560,437	-		Atu2585	0.41	-0.7
2,560,459	+		Atu2585	0.44	-0.8
2,560,555	+		Atu2585	0.55	-2.0
2,560,641	+		Atu2585	0.65	-3.5
2,560,674	+		Atu2585	0.69	-1.3
2,560,674	+		Atu2585	0.69	-2.9
2,560,675	+		Atu2585	0.69	-1.8
2,560,744	-		Atu2585	0.78	-0.3
2,560,777	+		Atu2585	0.82	-5.0
2,560,866	-				-1.7
2,560,908	+				-2.0
2,560,916	-				-3.4
2,560,937	-				-3.4
2,561,022	+				-3.5
2,561,187	-				+1.4
2,561,201	+				+1.2
2,561,209	-				+2.5
2,561,232	-				+0.2
2,561,235	+				+0.3
2,561,235	+				+0.3
2,561,287	-				+0.8
2,561,446	+				+2.0
2,561,521	+		Atu2586	0.14	+2.0
2,561,593	+		Atu2586	0.17	+3.0
2,561,617	+		Atu2586	0.19	+1.6
2,561,719	-		Atu2586	0.24	+1.7
2,561,729	+		Atu2586	0.25	+0.8
2,561,762	-		Atu2586	0.26	+1.5
2,561,796	+		Atu2586	0.28	+1.8
2,561,801	+		Atu2586	0.28	+2.1
2,561,854	+		Atu2586	0.31	+2.0
2,561,862	-		Atu2586	0.32	+2.5
2,561,862	-		Atu2586	0.32	+1.7
2,561,868	-		Atu2586	0.32	+1.0
2,561,897	+		Atu2586	0.33	-0.5
2,561,897	+		Atu2586	0.33	-0.5
2,561,905	-		Atu2586	0.34	+1.1
2,561,993	-		Atu2586	0.39	+0.8
2,562,032	+		Atu2586	0.41	+0.7
2,562,052	-		Atu2586	0.42	+0.6
2,562,120	+		Atu2586	0.45	-1.1
2,562,188	+		Atu2586	0.49	-0.8
2,562,279	+		Atu2586	0.54	+1.3
2,562,280	-		Atu2586	0.54	+1.5
2,562,312	+		Atu2586	0.55	+1.5
2,562,365	-		Atu2586	0.58	+1.2
2,562,391	+		Atu2586	0.60	+1.7
2,562,399	-		Atu2586	0.60	+1.3
2,562,402	+		Atu2586	0.60	+2.1
2,562,402	+		Atu2586	0.60	+1.7
2,562,531	+		Atu2586	0.67	+1.6
2,562,539	-		Atu2586	0.67	+1.0
2,562,576	-		Atu2586	0.69	-0.7
2,562,621	+		Atu2586	0.72	-2.3
2,562,621	+		Atu2586	0.72	+1.6
2,562,845	+		Atu2586	0.84	+2.0
2,562,855	+		Atu2586	0.84	+1.6
2,562,855	+		Atu2586	0.84	+1.7
2,562,863	-		Atu2586	0.84	+1.5
2,562,873	-		Atu2586	0.85	+1.5
2,562,880	-		Atu2586	0.85	+2.0
2,563,052	-				+1.4
2,563,052	-				+0.1
2,563,052	-				+3.9
2,563,054	+				+0.8
2,563,227	-				+1.4
2,563,282	-				+0.9
2,563,328	+				-0.5
2,563,336	+				+1.7
2,563,469	+		Atu2587	0.17	+1.5
2,563,477	-		Atu2587	0.17	+2.3
2,563,507	-		Atu2587	0.19	+2.2
2,563,507	-		Atu2587	0.19	+1.9
2,563,507	-		Atu2587	0.19	+1.5
2,563,507	-		Atu2587	0.19	+1.5
2,563,524	-		Atu2587	0.20	+1.5
2,563,542	+		Atu2587	0.20	+1.3
2,563,677	+		Atu2587	0.28	+0.8
2,563,693	-		Atu2587	0.28	+1.0
2,563,728	+		Atu2587	0.30	+1.2
2,563,736	-		Atu2587	0.31	+1.7
2,563,847	-		Atu2587	0.36	+0.3
2,563,909	-		Atu2587	0.40	+2.0
2,563,909	-		Atu2587	0.40	+1.7
2,563,909	-		Atu2587	0.40	-0.1
2,563,961	+		Atu2587	0.42	+1.8
2,564,009	-		Atu2587	0.45	+1.5