Strain Fitness in Agrobacterium fabrum C58 around Atu2549

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
2,519,197	+				+0.7
2,519,246	+				-0.8
2,519,278	+				+0.9
2,519,286	-				+3.2
2,519,286	-				+1.5
2,519,288	+				+1.2
2,519,332	+		Atu2548	0.13	+2.5
2,519,337	+		Atu2548	0.13	+1.5
2,519,368	+		Atu2548	0.17	+0.6
2,519,401	-		Atu2548	0.20	+1.7
2,519,406	-		Atu2548	0.21	+0.5
2,519,408	+		Atu2548	0.21	+0.6
2,519,430	+		Atu2548	0.23	+4.2
2,519,486	-		Atu2548	0.29	+2.6
2,519,494	+		Atu2548	0.30	+0.8
2,519,525	+		Atu2548	0.33	+1.5
2,519,533	+		Atu2548	0.34	+1.8
2,519,547	+		Atu2548	0.35	+0.6
2,519,549	+		Atu2548	0.36	-0.2
2,519,559	+		Atu2548	0.37	+1.9
2,519,565	+		Atu2548	0.37	+3.1
2,519,570	+		Atu2548	0.38	-1.6
2,519,578	-		Atu2548	0.39	-1.3
2,519,608	+		Atu2548	0.42	+1.1
2,519,681	-		Atu2548	0.49	+3.1
2,519,692	-		Atu2548	0.51	+2.3
2,519,725	+		Atu2548	0.54	-0.4
2,519,733	-		Atu2548	0.55	+1.5
2,519,735	+		Atu2548	0.55	+2.2
2,519,748	-		Atu2548	0.56	+2.7
2,519,756	+		Atu2548	0.57	-0.3
2,519,756	+		Atu2548	0.57	+1.0
2,519,756	+		Atu2548	0.57	+1.8
2,519,756	+		Atu2548	0.57	+0.4
2,519,764	-		Atu2548	0.58	+4.0
2,519,764	-		Atu2548	0.58	+2.0
2,519,764	-		Atu2548	0.58	+1.8
2,519,774	-		Atu2548	0.59	+1.7
2,519,799	-		Atu2548	0.62	-1.7
2,519,799	-		Atu2548	0.62	+1.8
2,519,877	-		Atu2548	0.70	+1.5
2,519,963	+		Atu2548	0.79	-0.5
2,519,990	+		Atu2548	0.82	+1.5
2,520,038	-		Atu2548	0.87	+3.3
2,520,044	+		Atu2548	0.88	-0.2
2,520,044	+		Atu2548	0.88	+0.7
2,520,044	+		Atu2548	0.88	+1.5
2,520,052	-		Atu2548	0.88	+1.9
2,520,052	-		Atu2548	0.88	+1.8
2,520,098	-				+2.2
2,520,133	+				+0.7
2,520,133	+				+1.0
2,520,155	+				-1.3
2,520,155	+				+1.5
2,520,155	+				-1.0
2,520,163	-				-0.1
2,520,344	-		Atu2549	0.27	+2.5
2,520,347	-		Atu2549	0.28	+3.5
2,520,349	-		Atu2549	0.28	+1.9
2,520,434	+		Atu2549	0.41	+1.5
2,520,457	+		Atu2549	0.44	+2.3
2,520,475	+		Atu2549	0.47	-0.3
2,520,504	+		Atu2549	0.51	+2.2
2,520,512	-		Atu2549	0.53	+2.5
2,520,554	-		Atu2549	0.59	+3.0
2,520,560	-		Atu2549	0.60	+2.8
2,520,562	+		Atu2549	0.60	+2.6
2,520,593	+		Atu2549	0.65	+1.0
2,520,635	+		Atu2549	0.71	+2.0
2,520,640	+		Atu2549	0.72	+3.1
2,520,651	+		Atu2549	0.74	+2.6
2,520,707	+		Atu2549	0.82	+0.8
2,520,710	-		Atu2549	0.83	+2.4
2,520,711	+		Atu2549	0.83	+2.5
2,520,806	-				-1.3
2,520,866	+				-0.3
2,520,866	+				-0.8
2,520,874	-				-2.1
2,520,874	-				+1.5
2,520,881	-				-1.0
2,520,897	+				-1.1
2,520,926	+				-2.3
2,520,942	-				-3.5
2,521,188	-		Atu2550	0.14	-0.8
2,521,188	-		Atu2550	0.14	-0.5
2,521,334	-		Atu2550	0.26	-1.3
2,521,334	-		Atu2550	0.26	+1.2
2,521,360	+		Atu2550	0.28	-0.9
2,521,406	-		Atu2550	0.32	-1.8
2,521,406	-		Atu2550	0.32	-2.6
2,521,423	-		Atu2550	0.33	-0.1
2,521,496	-		Atu2550	0.39	+0.5
2,521,498	+		Atu2550	0.39	-1.5
2,521,503	+		Atu2550	0.40	-2.8
2,521,503	+		Atu2550	0.40	-4.1
2,521,503	+		Atu2550	0.40	-0.5
2,521,506	-		Atu2550	0.40	-2.2
2,521,511	-		Atu2550	0.40	-1.8
2,521,535	+		Atu2550	0.42	-0.7
2,521,569	-		Atu2550	0.45	-1.7
2,521,621	-		Atu2550	0.50	-2.7
2,521,638	-		Atu2550	0.51	-0.6
2,521,639	+		Atu2550	0.51	-0.6
2,521,664	+		Atu2550	0.53	-1.0
2,521,672	-		Atu2550	0.54	-3.5
2,521,726	-		Atu2550	0.58	-0.8
2,521,726	-		Atu2550	0.58	-2.4
2,521,726	-		Atu2550	0.58	-3.5