Strain Fitness in Agrobacterium fabrum C58 around Atu2528

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
2,500,242	-				+0.5
2,500,342	-		Atu2527	0.16	-1.8
2,500,352	-		Atu2527	0.17	-0.5
2,500,431	+		Atu2527	0.26	+1.5
2,500,579	+		Atu2527	0.42	-0.3
2,500,579	+		Atu2527	0.42	+0.9
2,500,587	-		Atu2527	0.43	+1.3
2,500,624	+		Atu2527	0.47	+0.5
2,500,684	+		Atu2527	0.54	+0.8
2,500,689	+		Atu2527	0.55	-1.6
2,500,696	+		Atu2527	0.56	+2.1
2,500,768	-		Atu2527	0.64	+1.1
2,500,819	+		Atu2527	0.69	+0.0
2,500,829	-		Atu2527	0.70	-0.3
2,500,978	+		Atu2527	0.87	-0.1
2,501,096	+				-2.2
2,501,118	-				-0.9
2,501,129	-				+0.7
2,501,250	+		Atu2528	0.14	+0.5
2,501,250	+		Atu2528	0.14	+0.3
2,501,288	+		Atu2528	0.18	-0.8
2,501,293	+		Atu2528	0.18	-1.1
2,501,417	-		Atu2528	0.30	+1.1
2,501,432	+		Atu2528	0.31	+1.1
2,501,432	+		Atu2528	0.31	+0.6
2,501,684	+		Atu2528	0.55	+1.7
2,501,699	-		Atu2528	0.56	-1.5
2,501,699	-		Atu2528	0.56	+0.1
2,501,704	+		Atu2528	0.57	+0.8
2,501,729	+		Atu2528	0.59	-0.5
2,501,761	+		Atu2528	0.62	-0.4
2,501,775	+		Atu2528	0.64	+1.5
2,501,813	-		Atu2528	0.67	+0.5
2,501,814	-		Atu2528	0.67	+0.7
2,501,845	+		Atu2528	0.70	+0.4
2,501,950	+		Atu2528	0.80	+0.2
2,501,960	-		Atu2528	0.81	+0.0
2,501,993	+		Atu2528	0.84	+0.1
2,502,055	-				-0.1
2,502,142	-				-0.3
2,502,144	-				-0.1
2,502,178	-				+0.3
2,502,178	-				+0.4
2,502,259	-				+0.4
2,502,338	+		Atu2529	0.18	-1.1
2,502,431	+		Atu2529	0.27	+0.1
2,502,469	+		Atu2529	0.31	-0.0
2,502,477	-		Atu2529	0.32	-2.7
2,502,477	-		Atu2529	0.32	-2.3
2,502,533	+		Atu2529	0.38	+1.1
2,502,541	-		Atu2529	0.39	-0.4
2,502,565	+		Atu2529	0.41	+0.1
2,502,565	+		Atu2529	0.41	+2.1
2,502,590	-		Atu2529	0.43	+0.2
2,502,690	+		Atu2529	0.54	-2.3
2,502,760	+		Atu2529	0.61	-0.4
2,502,768	-		Atu2529	0.62	-1.0
2,502,801	+		Atu2529	0.65	+1.5
2,502,832	-		Atu2529	0.68	+0.3
2,502,835	+		Atu2529	0.68	-3.4
2,502,848	-		Atu2529	0.70	-0.1
2,503,052	+				+0.5
2,503,052	-				-1.7
2,503,089	+				+0.9
2,503,097	-				+0.5
2,503,129	-				-0.1