Strain Fitness in Agrobacterium fabrum C58 around Atu1859

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,837,701	-				+0.8
1,837,706	-				-2.0
1,837,707	+				+1.1
1,837,769	+				-2.1
1,837,785	+		Atu1858	0.10	+0.9
1,837,854	+		Atu1858	0.17	+1.6
1,837,877	-		Atu1858	0.20	-1.7
1,838,178	-		Atu1858	0.52	+1.4
1,838,334	-		Atu1858	0.69	+1.2
1,838,500	-		Atu1858	0.86	+2.2
1,838,504	+		Atu1858	0.87	-1.3
1,838,615	-				+0.2
1,838,756	-				-0.1
1,838,816	-		Atu1859	0.13	-0.1
1,838,821	+		Atu1859	0.14	+0.2
1,838,926	-		Atu1859	0.25	-1.2
1,838,999	-		Atu1859	0.33	-2.1
1,839,021	+		Atu1859	0.35	-0.9
1,839,029	-		Atu1859	0.36	+2.6
1,839,145	+		Atu1859	0.49	+0.0
1,839,377	-		Atu1859	0.74	-1.6
1,839,426	-		Atu1859	0.79	-2.0
1,839,509	+		Atu1859	0.88	-1.2
1,839,528	-				+0.6
1,839,550	+				-2.1
1,839,558	-				-0.1
1,839,612	-				+0.3
1,839,619	+				-0.7
1,839,619	+				+0.6