Strain Fitness in Agrobacterium fabrum C58 around Atu1338

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,322,030	-				-0.3
1,322,054	-				-0.7
1,322,054	-				+0.6
1,322,271	+		Atu1336	0.32	+0.4
1,322,272	-		Atu1336	0.32	+0.7
1,322,274	-		Atu1336	0.33	-0.6
1,322,321	-		Atu1336	0.47	+2.0
1,322,364	-		Atu1336	0.60	-1.3
1,322,462	+				+0.1
1,322,475	+				+0.2
1,322,483	-				-2.2
1,322,692	-		Atu1337	0.55	-2.3
1,322,702	-		Atu1337	0.58	+0.2
1,322,717	-		Atu1337	0.62	+0.2
1,322,723	-		Atu1337	0.64	+0.7
1,322,942	-				-2.2
1,322,966	+				-0.8
1,323,099	+		Atu1338	0.16	-2.2
1,323,143	+		Atu1338	0.23	-0.3
1,323,153	+		Atu1338	0.24	-0.1
1,323,153	+		Atu1338	0.24	-0.0
1,323,222	+		Atu1338	0.34	-0.7
1,323,384	+		Atu1338	0.57	-2.4
1,323,631	+				+0.2
1,323,633	+				-0.3
1,323,639	-				-0.7
1,323,641	-				+1.2
1,323,641	-				-1.2
1,323,641	-				+0.2
1,323,653	+				-1.0
1,323,934	-				+1.5
1,324,051	-				+2.7
1,324,185	+		Atu1339	0.13	-0.1
1,324,191	-		Atu1339	0.13	+0.4
1,324,234	+		Atu1339	0.15	+2.4
1,324,479	-		Atu1339	0.23	+1.5