Strain Fitness in Agrobacterium fabrum C58 around Atu0983
Experiment: Chloramphenicol 12.5 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 12.5 ug/mL |
|---|---|---|---|---|---|
| remove | |||||
| 976,752 | - | -1.0 | |||
| 976,752 | - | +0.3 | |||
| 976,752 | - | +1.6 | |||
| 976,998 | + | +0.5 | |||
| 977,032 | + | +0.2 | |||
| 977,085 | + | -0.1 | |||
| 977,085 | + | +1.0 | |||
| 977,085 | + | -0.4 | |||
| 977,130 | - | +0.1 | |||
| 977,134 | - | -2.7 | |||
| 977,163 | - | Atu0983 | 0.16 | +1.4 | |
| 977,291 | + | Atu0983 | 0.55 | +0.6 | |
| 977,460 | + | -1.8 | |||
| 977,538 | + | +0.6 | |||
| 977,551 | - | +0.0 | |||
| 977,573 | + | -2.1 | |||
| 977,749 | - | +1.1 | |||
| 977,776 | - | -0.3 | |||
| 977,799 | + | -0.5 | |||
| 977,831 | - | -0.1 | |||
| 977,859 | - | Atu0984 | 0.11 | +0.2 | |
| 978,032 | - | Atu0984 | 0.17 | -0.7 | |
| 978,105 | - | Atu0984 | 0.20 | -1.0 | |
| 978,280 | - | Atu0984 | 0.27 | +2.8 | |
| 978,324 | + | Atu0984 | 0.28 | -0.4 | |
| 978,418 | - | Atu0984 | 0.32 | -0.7 |
Or see this region's nucleotide sequence