Strain Fitness in Agrobacterium fabrum C58 around Atu6074

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
87,269	-		Atu6073	0.45	-1.4
87,306	+		Atu6073	0.47	-0.7
87,316	+		Atu6073	0.48	+0.8
87,316	+		Atu6073	0.48	+0.0
87,324	-		Atu6073	0.48	-0.1
87,324	-		Atu6073	0.48	-0.3
87,324	-		Atu6073	0.48	-0.7
87,339	+		Atu6073	0.49	+0.9
87,339	+		Atu6073	0.49	+0.0
87,345	-		Atu6073	0.49	+0.7
87,357	+		Atu6073	0.50	+0.7
87,400	+		Atu6073	0.53	+1.0
87,474	+		Atu6073	0.57	+0.5
87,477	-		Atu6073	0.58	-0.7
87,479	+		Atu6073	0.58	-1.6
87,531	+		Atu6073	0.61	-1.1
87,531	+		Atu6073	0.61	+1.1
87,531	+		Atu6073	0.61	-0.4
87,531	+		Atu6073	0.61	+0.2
87,531	+		Atu6073	0.61	-0.3
87,539	-		Atu6073	0.62	+1.0
87,539	-		Atu6073	0.62	-0.0
87,539	-		Atu6073	0.62	-0.4
87,539	-		Atu6073	0.62	-0.3
87,539	-		Atu6073	0.62	+1.1
87,539	-		Atu6073	0.62	-0.4
87,539	-		Atu6073	0.62	+0.0
87,545	+		Atu6073	0.62	-0.6
87,692	+		Atu6073	0.71	+0.9
87,692	+		Atu6073	0.71	-2.6
87,700	-		Atu6073	0.72	-1.9
87,700	-		Atu6073	0.72	+0.7
87,700	-		Atu6073	0.72	+0.6
87,817	+		Atu6073	0.79	+1.1
87,817	+		Atu6073	0.79	-1.1
87,825	-		Atu6073	0.79	-0.3
87,830	+		Atu6073	0.80	-1.0
87,858	+		Atu6073	0.82	-0.4
87,858	+		Atu6073	0.82	+1.4
87,866	+		Atu6073	0.82	+1.8
87,866	+		Atu6073	0.82	+1.2
87,866	-		Atu6073	0.82	-0.6
87,874	-		Atu6073	0.83	-0.1
87,874	-		Atu6073	0.83	+1.6
87,893	+		Atu6073	0.84	+0.4
87,893	+		Atu6073	0.84	+1.0
87,901	-		Atu6073	0.84	-1.6
87,932	+		Atu6073	0.86	-2.0
87,957	-		Atu6073	0.88	-0.7
87,968	-		Atu6073	0.88	+1.0
88,061	-				+1.7
88,079	+				-0.5
88,189	+				+0.2
88,189	+				+0.6
88,197	-				+1.4
88,321	+				-1.5
88,440	-		Atu6074	0.14	+0.3
88,474	-		Atu6074	0.16	-1.7
88,480	+		Atu6074	0.16	+0.1
88,515	+		Atu6074	0.18	-0.8
88,540	+		Atu6074	0.20	-0.7
88,630	+		Atu6074	0.25	-0.9
88,679	-		Atu6074	0.28	+0.0
88,690	-		Atu6074	0.29	-0.3
88,735	+		Atu6074	0.31	-0.4
88,735	+		Atu6074	0.31	-0.5
88,739	-		Atu6074	0.32	-0.6
88,745	+		Atu6074	0.32	-2.3
88,756	+		Atu6074	0.33	-0.4
88,756	+		Atu6074	0.33	+0.0
88,764	-		Atu6074	0.33	+0.6
88,918	+		Atu6074	0.42	+0.7
89,021	-		Atu6074	0.49	+0.5
89,046	-		Atu6074	0.50	-0.5
89,070	+		Atu6074	0.52	-0.5
89,070	+		Atu6074	0.52	-0.6
89,134	-		Atu6074	0.55	-1.4
89,162	+		Atu6074	0.57	-0.2
89,162	+		Atu6074	0.57	+1.0
89,170	-		Atu6074	0.58	-1.0
89,170	-		Atu6074	0.58	-0.2
89,221	-		Atu6074	0.61	+0.4
89,237	-		Atu6074	0.62	+1.0
89,250	+		Atu6074	0.62	-0.8
89,256	+		Atu6074	0.63	-1.5
89,258	+		Atu6074	0.63	+0.6
89,266	-		Atu6074	0.63	-0.9
89,328	-		Atu6074	0.67	+1.1
89,350	+		Atu6074	0.68	-0.4
89,359	-		Atu6074	0.69	-2.8
89,384	+		Atu6074	0.70	-0.6
89,433	+		Atu6074	0.73	+0.1
89,521	+		Atu6074	0.79	+0.0
89,522	-		Atu6074	0.79	-2.7
89,547	-		Atu6074	0.80	+3.2
89,555	+		Atu6074	0.81	+0.8
89,591	-		Atu6074	0.83	-0.7
89,633	-		Atu6074	0.85	+1.4
89,705	+		Atu6074	0.90	+0.1
89,705	+		Atu6074	0.90	+0.6
89,705	+		Atu6074	0.90	+1.8
89,705	+		Atu6074	0.90	-1.0
89,705	+		Atu6074	0.90	-1.1
89,713	-				+0.2
89,713	-				+0.6
89,713	-				-1.6
89,713	-				-2.4
89,715	+				-0.7
89,715	+				-0.1
89,715	+				-0.7
89,715	+				-1.3
89,715	+				-1.6
89,715	+				-0.7
89,723	-				+1.3
89,760	+				-2.4
89,797	+				-0.6
89,811	+				+0.1
89,860	+				+0.6
89,921	+				+2.7
89,942	-				-0.8
89,942	-				-0.9
90,004	+		Atu6075	0.13	+0.8
90,080	+		Atu6075	0.22	-0.5
90,085	+		Atu6075	0.22	+1.1
90,103	-		Atu6075	0.24	+1.5
90,110	+		Atu6075	0.25	+0.8
90,124	+		Atu6075	0.26	-0.4
90,264	+		Atu6075	0.41	+1.2
90,296	-		Atu6075	0.44	+1.4
90,296	-		Atu6075	0.44	+0.6
90,304	-		Atu6075	0.45	-0.0
90,306	+		Atu6075	0.46	-0.7
90,376	+		Atu6075	0.53	-0.0
90,457	+		Atu6075	0.62	-0.1
90,506	+		Atu6075	0.67	-0.8
90,522	-		Atu6075	0.68	+0.9
90,527	-		Atu6075	0.69	-0.8
90,536	+		Atu6075	0.70	-2.2
90,537	-		Atu6075	0.70	+1.2
90,555	-		Atu6075	0.72	-1.8
90,586	+		Atu6075	0.75	-0.9
90,662	+		Atu6075	0.83	+0.6
90,717	+		Atu6075	0.89	+0.5
90,821	-				-0.2
90,857	-				-3.2
90,860	+				+1.0