Strain Fitness in Agrobacterium fabrum C58 around Atu6073

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
85,579	-		Atu6072	0.27	+0.9
85,588	-		Atu6072	0.27	-0.5
85,599	+		Atu6072	0.28	-0.4
85,607	-		Atu6072	0.29	-1.0
85,607	-		Atu6072	0.29	-0.4
85,658	-		Atu6072	0.33	-0.7
85,745	-		Atu6072	0.40	-0.6
85,757	-		Atu6072	0.41	-0.1
85,929	-		Atu6072	0.56	+0.3
85,958	+		Atu6072	0.58	+1.0
86,007	+		Atu6072	0.62	-1.3
86,107	+		Atu6072	0.70	+0.8
86,145	+		Atu6072	0.73	-0.0
86,155	+		Atu6072	0.74	-0.3
86,213	-		Atu6072	0.79	+1.1
86,280	-		Atu6072	0.84	-1.2
86,320	-		Atu6072	0.88	+1.0
86,421	-				-0.4
86,463	+				+0.0
86,470	+				+0.9
86,471	-				+1.9
86,512	+				+1.0
86,545	+				+0.8
86,620	+				+0.0
86,636	-				+0.1
86,647	+				+0.4
86,648	-				-1.2
86,658	+				-1.0
86,697	+				-1.2
86,705	-				-0.0
86,782	+		Atu6073	0.14	+0.0
86,782	+		Atu6073	0.14	+0.2
86,790	-		Atu6073	0.15	+0.7
86,824	-		Atu6073	0.17	+0.5
86,870	-		Atu6073	0.20	+0.4
86,870	-		Atu6073	0.20	+0.6
86,920	-		Atu6073	0.23	-0.0
86,921	+		Atu6073	0.23	-0.5
86,992	+		Atu6073	0.27	+0.2
87,020	-		Atu6073	0.29	+1.1
87,025	-		Atu6073	0.29	-0.1
87,043	+		Atu6073	0.30	+0.8
87,107	+		Atu6073	0.34	+0.0
87,112	+		Atu6073	0.35	-2.7
87,176	-		Atu6073	0.39	-0.2
87,193	+		Atu6073	0.40	-1.2
87,193	+		Atu6073	0.40	-2.4
87,194	+		Atu6073	0.40	+1.7
87,194	+		Atu6073	0.40	-0.4
87,194	+		Atu6073	0.40	+1.5
87,269	-		Atu6073	0.45	-1.4
87,306	+		Atu6073	0.47	-0.7
87,316	+		Atu6073	0.48	+0.8
87,316	+		Atu6073	0.48	+0.0
87,324	-		Atu6073	0.48	-0.1
87,324	-		Atu6073	0.48	-0.3
87,324	-		Atu6073	0.48	-0.7
87,339	+		Atu6073	0.49	+0.9
87,339	+		Atu6073	0.49	+0.0
87,345	-		Atu6073	0.49	+0.7
87,357	+		Atu6073	0.50	+0.7
87,400	+		Atu6073	0.53	+1.0
87,474	+		Atu6073	0.57	+0.5
87,477	-		Atu6073	0.58	-0.7
87,479	+		Atu6073	0.58	-1.6
87,531	+		Atu6073	0.61	-1.1
87,531	+		Atu6073	0.61	+1.1
87,531	+		Atu6073	0.61	-0.4
87,531	+		Atu6073	0.61	+0.2
87,531	+		Atu6073	0.61	-0.3
87,539	-		Atu6073	0.62	+1.0
87,539	-		Atu6073	0.62	-0.0
87,539	-		Atu6073	0.62	-0.4
87,539	-		Atu6073	0.62	-0.3
87,539	-		Atu6073	0.62	+1.1
87,539	-		Atu6073	0.62	-0.4
87,539	-		Atu6073	0.62	+0.0
87,545	+		Atu6073	0.62	-0.6
87,692	+		Atu6073	0.71	+0.9
87,692	+		Atu6073	0.71	-2.6
87,700	-		Atu6073	0.72	-1.9
87,700	-		Atu6073	0.72	+0.7
87,700	-		Atu6073	0.72	+0.6
87,817	+		Atu6073	0.79	+1.1
87,817	+		Atu6073	0.79	-1.1
87,825	-		Atu6073	0.79	-0.3
87,830	+		Atu6073	0.80	-1.0
87,858	+		Atu6073	0.82	-0.4
87,858	+		Atu6073	0.82	+1.4
87,866	+		Atu6073	0.82	+1.8
87,866	+		Atu6073	0.82	+1.2
87,866	-		Atu6073	0.82	-0.6
87,874	-		Atu6073	0.83	-0.1
87,874	-		Atu6073	0.83	+1.6
87,893	+		Atu6073	0.84	+0.4
87,893	+		Atu6073	0.84	+1.0
87,901	-		Atu6073	0.84	-1.6
87,932	+		Atu6073	0.86	-2.0
87,957	-		Atu6073	0.88	-0.7
87,968	-		Atu6073	0.88	+1.0
88,061	-				+1.7
88,079	+				-0.5
88,189	+				+0.2
88,189	+				+0.6
88,197	-				+1.4
88,321	+				-1.5
88,440	-		Atu6074	0.14	+0.3
88,474	-		Atu6074	0.16	-1.7
88,480	+		Atu6074	0.16	+0.1
88,515	+		Atu6074	0.18	-0.8
88,540	+		Atu6074	0.20	-0.7
88,630	+		Atu6074	0.25	-0.9
88,679	-		Atu6074	0.28	+0.0
88,690	-		Atu6074	0.29	-0.3
88,735	+		Atu6074	0.31	-0.4
88,735	+		Atu6074	0.31	-0.5
88,739	-		Atu6074	0.32	-0.6
88,745	+		Atu6074	0.32	-2.3
88,756	+		Atu6074	0.33	-0.4
88,756	+		Atu6074	0.33	+0.0
88,764	-		Atu6074	0.33	+0.6
88,918	+		Atu6074	0.42	+0.7
89,021	-		Atu6074	0.49	+0.5
89,046	-		Atu6074	0.50	-0.5
89,070	+		Atu6074	0.52	-0.5
89,070	+		Atu6074	0.52	-0.6
89,134	-		Atu6074	0.55	-1.4