Strain Fitness in Agrobacterium fabrum C58 around Atu5069

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
66,962	-		Atu5068	0.38	-1.6
67,128	+		Atu5068	0.48	+0.0
67,158	+		Atu5068	0.50	+0.6
67,165	+		Atu5068	0.50	-0.1
67,167	-		Atu5068	0.51	+0.1
67,167	-		Atu5068	0.51	-0.0
67,173	+		Atu5068	0.51	-0.6
67,221	-		Atu5068	0.54	-0.5
67,330	-		Atu5068	0.61	-1.1
67,369	+		Atu5068	0.63	+1.5
67,369	+		Atu5068	0.63	-0.9
67,369	+		Atu5068	0.63	-1.0
67,369	+		Atu5068	0.63	+0.8
67,369	+		Atu5068	0.63	-1.2
67,377	-		Atu5068	0.64	-2.4
67,377	-		Atu5068	0.64	-0.5
67,396	-		Atu5068	0.65	+2.4
67,410	-		Atu5068	0.66	-2.0
67,528	+		Atu5068	0.73	-0.6
67,560	-		Atu5068	0.75	+0.2
67,570	+		Atu5068	0.75	-0.1
67,570	+		Atu5068	0.75	+1.3
67,578	-		Atu5068	0.76	+0.0
67,583	-		Atu5068	0.76	+1.0
67,633	-		Atu5068	0.79	-0.5
67,648	+		Atu5068	0.80	-0.8
67,656	-		Atu5068	0.81	-1.4
67,695	+		Atu5068	0.83	-0.1
67,703	-		Atu5068	0.84	-4.6
67,749	+		Atu5068	0.86	+0.2
67,762	-		Atu5068	0.87	-0.5
67,820	-				-0.0
67,826	+				-0.5
67,834	-				-1.7
67,878	+				+0.1
67,897	+				-0.9
67,905	-				-1.1
68,004	-				-0.5
68,004	-				-0.3
68,006	-				-1.8
68,009	-				-0.3
68,009	-				-0.1
68,009	-				-2.1
68,009	-				-1.7
68,009	-				-1.2
68,154	-		Atu5069	0.20	-0.4
68,187	-		Atu5069	0.24	+0.8
68,224	+		Atu5069	0.28	+1.6
68,242	+		Atu5069	0.30	-2.2
68,364	-		Atu5069	0.43	+0.3
68,404	+		Atu5069	0.47	-1.0
68,539	-		Atu5069	0.61	-1.3
68,539	-		Atu5069	0.61	+0.4
68,551	-		Atu5069	0.62	-2.7
68,571	+		Atu5069	0.64	+0.6
68,645	+		Atu5069	0.72	-0.1
68,736	+		Atu5069	0.82	-0.2
68,736	+		Atu5069	0.82	-1.4
68,736	+		Atu5069	0.82	-0.0
68,736	+		Atu5069	0.82	-0.1
68,739	-		Atu5069	0.82	-0.4
68,744	-		Atu5069	0.83	+0.0
68,744	-		Atu5069	0.83	-1.7
68,744	-		Atu5069	0.83	+0.8
68,744	-		Atu5069	0.83	-1.1
68,807	+		Atu5069	0.89	+0.2
68,885	+				+0.2
68,885	+				-1.0
68,893	-				+0.3
68,950	+				-0.1
68,988	+				-2.2
69,108	+		Atu5070	0.20	+0.2
69,136	-		Atu5070	0.23	-0.1
69,220	+		Atu5070	0.33	+0.8
69,220	+		Atu5070	0.33	+1.2
69,220	+		Atu5070	0.33	+0.4
69,220	+		Atu5070	0.33	-0.2
69,228	-		Atu5070	0.33	+0.6
69,228	-		Atu5070	0.33	+0.3
69,228	-		Atu5070	0.33	+0.8
69,228	-		Atu5070	0.33	+0.3
69,238	-		Atu5070	0.35	-2.1
69,259	-		Atu5070	0.37	+0.5
69,281	+		Atu5070	0.39	+0.5
69,510	-		Atu5070	0.64	-0.4
69,546	+		Atu5070	0.68	-0.8
69,546	+		Atu5070	0.68	-0.8
69,547	-		Atu5070	0.68	+0.4
69,573	+		Atu5070	0.71	-0.2
69,574	-		Atu5070	0.71	-0.3
69,618	+		Atu5070	0.76	-0.5
69,666	+		Atu5070	0.81	-0.2
69,669	-		Atu5070	0.82	-1.0
69,673	-		Atu5070	0.82	-0.7
69,682	+		Atu5070	0.83	+0.3
69,794	+				-1.4
69,842	+				-0.4
69,855	+				-0.0
69,887	-				+0.8