Strain Fitness in Agrobacterium fabrum C58 around Atu4772

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,940,180	+		Atu4771	0.20	-0.1
1,940,217	+		Atu4771	0.23	-0.0
1,940,218	-		Atu4771	0.23	+0.1
1,940,320	+		Atu4771	0.31	+1.3
1,940,328	+		Atu4771	0.32	+0.1
1,940,328	-		Atu4771	0.32	+0.3
1,940,328	-		Atu4771	0.32	+0.4
1,940,333	+		Atu4771	0.32	+0.4
1,940,419	+		Atu4771	0.39	-0.4
1,940,445	+		Atu4771	0.41	-0.2
1,940,451	-		Atu4771	0.42	+0.0
1,940,505	-		Atu4771	0.46	-0.4
1,940,558	+		Atu4771	0.50	+2.0
1,940,978	+		Atu4771	0.84	+0.5
1,941,032	+		Atu4771	0.88	+1.3
1,941,230	+		Atu4772	0.11	-2.5
1,941,261	-		Atu4772	0.17	-2.4
1,941,277	+		Atu4772	0.21	-0.5
1,941,397	+		Atu4772	0.47	-1.4
1,941,472	-		Atu4772	0.63	-0.2
1,941,631	-				-0.8
1,941,648	-				+0.0
1,941,648	-				+2.0
1,941,648	-				-0.5
1,941,681	-				-0.1
1,941,747	-				-0.5
1,941,751	+				+0.4
1,941,914	+				-1.7
1,941,922	-				-0.1
1,941,924	+				+0.3
1,941,975	-				+0.3
1,942,026	-		Atu4773	0.15	+2.5
1,942,086	-		Atu4773	0.31	+3.2
1,942,316	-				+2.3
1,942,389	-				-1.5
1,942,548	-		Atu4774	0.21	-0.1
1,942,583	+		Atu4774	0.27	-3.0
1,942,599	+		Atu4774	0.29	-1.1
1,942,607	-		Atu4774	0.30	-0.6