Strain Fitness in Agrobacterium fabrum C58 around Atu4747

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,915,843	+				+1.2
1,915,874	-				+1.9
1,915,963	-		Atu4746	0.18	-0.9
1,916,019	-		Atu4746	0.23	-0.1
1,916,071	-		Atu4746	0.28	-0.6
1,916,203	+		Atu4746	0.41	+2.2
1,916,211	-		Atu4746	0.42	+0.7
1,916,214	+		Atu4746	0.42	+0.5
1,916,286	-		Atu4746	0.49	-0.2
1,916,325	-		Atu4746	0.53	+0.1
1,916,338	+		Atu4746	0.54	-0.4
1,916,338	+		Atu4746	0.54	-0.9
1,916,371	+		Atu4746	0.58	+1.1
1,916,371	+		Atu4746	0.58	-0.8
1,916,379	+		Atu4746	0.59	-0.1
1,916,538	+		Atu4746	0.74	-0.5
1,916,542	+		Atu4746	0.75	+0.0
1,916,550	-		Atu4746	0.75	+0.0
1,916,569	-		Atu4746	0.77	-0.3
1,916,588	+		Atu4746	0.79	+0.3
1,916,588	+		Atu4746	0.79	-1.4
1,916,634	+		Atu4746	0.84	+0.3
1,916,639	+		Atu4746	0.84	+2.3
1,916,764	+				+1.7
1,916,794	+				-0.7
1,916,802	-				-0.6
1,916,920	+		Atu4747	0.12	-1.9
1,917,007	-		Atu4747	0.21	+3.9
1,917,057	-		Atu4747	0.26	-1.6
1,917,074	+		Atu4747	0.28	-1.6
1,917,174	-		Atu4747	0.38	-0.1
1,917,232	-		Atu4747	0.44	-1.6
1,917,275	+		Atu4747	0.48	+0.9
1,917,308	-		Atu4747	0.51	-1.7
1,917,354	-		Atu4747	0.56	-0.9
1,917,361	-		Atu4747	0.57	-1.6
1,917,428	+		Atu4747	0.63	-0.1
1,917,464	+		Atu4747	0.67	-0.4
1,917,478	+		Atu4747	0.68	+0.7
1,917,483	+		Atu4747	0.69	+0.9
1,917,486	-		Atu4747	0.69	-1.9
1,917,493	+		Atu4747	0.70	+1.3
1,917,662	-		Atu4747	0.87	-0.3
1,917,716	-				-0.3
1,917,779	+				+0.2
1,917,820	+				+0.3
1,918,002	-		Atu4748	0.24	+1.2
1,918,003	+		Atu4748	0.25	-0.7
1,918,057	+		Atu4748	0.31	-0.4
1,918,057	+		Atu4748	0.31	-2.4
1,918,057	+		Atu4748	0.31	+0.9
1,918,065	-		Atu4748	0.32	+0.9
1,918,090	+		Atu4748	0.35	+0.2
1,918,258	-		Atu4748	0.54	+1.1
1,918,306	-		Atu4748	0.60	+0.4
1,918,483	+		Atu4748	0.81	-0.4
1,918,491	-		Atu4748	0.82	-0.5
1,918,491	-		Atu4748	0.82	-0.4
1,918,572	+				+0.3
1,918,572	+				+0.3
1,918,575	-				-0.6
1,918,582	-				+1.0
1,918,596	+				-1.8
1,918,603	-				+0.5
1,918,617	+				+0.2
1,918,625	-				-1.7