Strain Fitness in Agrobacterium fabrum C58 around Atu4679

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,836,970	+				-0.2
1,836,970	+				+0.5
1,837,236	-		Atu4678	0.40	+2.8
1,837,248	-		Atu4678	0.41	+0.6
1,837,324	-		Atu4678	0.51	+0.1
1,837,332	+		Atu4678	0.52	-0.5
1,837,372	+		Atu4678	0.57	+2.0
1,837,387	+		Atu4678	0.59	+0.2
1,837,413	-		Atu4678	0.62	+0.8
1,837,413	-		Atu4678	0.62	-3.6
1,837,413	-		Atu4678	0.62	-0.5
1,837,454	+		Atu4678	0.67	+0.6
1,837,472	+		Atu4678	0.69	-0.1
1,837,480	-		Atu4678	0.70	-1.3
1,837,499	+		Atu4678	0.72	+0.9
1,837,499	+		Atu4678	0.72	-0.1
1,837,499	+		Atu4678	0.72	-0.9
1,837,524	-		Atu4678	0.76	-0.1
1,837,547	+		Atu4678	0.78	+1.1
1,837,616	-		Atu4678	0.87	-1.2
1,838,005	+		Atu4679	0.32	-2.3
1,838,011	+		Atu4679	0.33	+0.7
1,838,061	-		Atu4679	0.40	-0.6
1,838,064	+		Atu4679	0.41	-0.6
1,838,067	-		Atu4679	0.41	+1.3
1,838,169	-		Atu4679	0.56	-1.1
1,838,260	+		Atu4679	0.70	+0.2
1,838,270	+		Atu4679	0.72	+1.8
1,838,279	+		Atu4679	0.73	-1.4
1,838,358	+		Atu4679	0.85	-1.7
1,838,463	+				-1.3
1,838,481	-				+1.0
1,838,488	+				+0.5
1,838,488	+				+0.1
1,838,496	-				-0.7
1,838,520	-				+0.5
1,838,613	-		Atu4680	0.22	-0.3
1,838,634	+		Atu4680	0.25	+0.3
1,838,686	+		Atu4680	0.33	-0.4
1,838,694	+		Atu4680	0.34	+1.8
1,838,853	+		Atu4680	0.58	+0.5
1,838,874	-		Atu4680	0.62	-2.3
1,838,916	-		Atu4680	0.68	+0.5
1,838,941	-		Atu4680	0.72	+0.6
1,838,998	-		Atu4680	0.81	+2.2
1,838,998	-		Atu4680	0.81	+0.5
1,839,028	-		Atu4680	0.85	+2.8
1,839,178	+				-0.6
1,839,178	+				-0.2
1,839,178	+				+0.3
1,839,181	-				-0.8
1,839,262	+		Atu4681	0.20	-0.3
1,839,262	+		Atu4681	0.20	-0.5
1,839,363	-		Atu4681	0.34	+0.3
1,839,429	+		Atu4681	0.43	+0.1