Strain Fitness in Agrobacterium fabrum C58 around Atu4667

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,825,402	-		Atu4666	0.29	-0.5
1,825,456	+		Atu4666	0.35	-1.7
1,825,562	+		Atu4666	0.45	-2.0
1,825,580	+		Atu4666	0.46	-2.0
1,825,600	-		Atu4666	0.48	+0.8
1,825,748	+		Atu4666	0.62	-2.4
1,825,879	-		Atu4666	0.74	-0.6
1,825,886	-		Atu4666	0.75	-2.3
1,825,918	-		Atu4666	0.78	-2.1
1,825,975	+		Atu4666	0.83	+2.8
1,826,174	-				-2.6
1,826,228	-				-1.3
1,826,228	-				-0.2
1,826,366	+				+0.2
1,826,432	+				-1.1
1,826,483	-		Atu4667	0.11	-0.8
1,826,483	-		Atu4667	0.11	-0.5
1,826,579	+		Atu4667	0.15	+0.1
1,826,652	+		Atu4667	0.18	-1.1
1,826,654	+		Atu4667	0.18	-1.8
1,826,667	-		Atu4667	0.18	-1.5
1,826,672	+		Atu4667	0.18	-0.6
1,826,680	-		Atu4667	0.19	+0.2
1,826,680	-		Atu4667	0.19	+0.4
1,826,680	-		Atu4667	0.19	-0.8
1,826,767	+		Atu4667	0.22	-1.2
1,826,796	+		Atu4667	0.23	+0.0
1,826,809	-		Atu4667	0.23	+0.2
1,826,992	-		Atu4667	0.30	-1.5
1,827,025	-		Atu4667	0.31	-0.5
1,827,041	-		Atu4667	0.32	+1.1
1,827,107	+		Atu4667	0.34	+0.6
1,827,107	+		Atu4667	0.34	-0.9
1,827,117	-		Atu4667	0.34	+0.2
1,827,295	-		Atu4667	0.41	-2.3
1,827,472	-		Atu4667	0.47	+0.2
1,827,521	+		Atu4667	0.49	-1.9
1,827,744	+		Atu4667	0.57	-0.2
1,827,752	-		Atu4667	0.57	+1.5
1,827,754	-		Atu4667	0.57	-0.8
1,827,847	-		Atu4667	0.61	-2.3
1,827,878	-		Atu4667	0.62	-3.5
1,827,906	-		Atu4667	0.63	+0.2
1,827,908	+		Atu4667	0.63	+3.8
1,827,921	-		Atu4667	0.63	-1.0
1,827,952	+		Atu4667	0.64	+2.5
1,827,960	-		Atu4667	0.65	-1.2
1,827,973	+		Atu4667	0.65	+1.8
1,827,981	-		Atu4667	0.65	-1.9
1,828,144	+		Atu4667	0.71	+1.2
1,828,228	-		Atu4667	0.74	-1.4
1,828,305	-		Atu4667	0.77	-1.7
1,828,322	-		Atu4667	0.78	-0.1
1,828,389	+		Atu4667	0.80	-1.4
1,828,511	-		Atu4667	0.84	-0.5
1,828,524	+		Atu4667	0.85	+1.8
1,828,601	-		Atu4667	0.88	+0.8
1,828,655	-		Atu4667	0.90	+1.3
1,828,785	+				-0.8
1,828,793	-				+1.6
1,828,845	-				-0.2
1,828,902	-				+0.4
1,829,023	-				-0.2
1,829,053	-		Atu4668	0.10	-0.7
1,829,053	-		Atu4668	0.10	-0.3
1,829,053	-		Atu4668	0.10	-0.9
1,829,135	+		Atu4668	0.18	-0.7
1,829,135	+		Atu4668	0.18	-0.1
1,829,320	+		Atu4668	0.34	+1.1
1,829,327	-		Atu4668	0.35	-1.9
1,829,409	+		Atu4668	0.42	+0.2
1,829,417	-		Atu4668	0.43	-2.9
1,829,504	+		Atu4668	0.51	-0.9
1,829,505	-		Atu4668	0.51	-1.1
1,829,590	-		Atu4668	0.58	-0.1
1,829,612	+		Atu4668	0.60	+0.2
1,829,620	-		Atu4668	0.61	+1.2
1,829,769	-		Atu4668	0.74	+0.7
1,829,851	+		Atu4668	0.82	+0.8
1,829,867	+		Atu4668	0.83	-0.8
1,829,890	+		Atu4668	0.85	-0.2