Strain Fitness in Agrobacterium fabrum C58 around Atu4656

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,809,834	-		Atu4655	0.20	-3.1
1,809,937	-		Atu4655	0.29	+0.9
1,809,972	+		Atu4655	0.32	+0.4
1,809,973	+		Atu4655	0.32	+0.6
1,809,973	+		Atu4655	0.32	-0.6
1,810,037	-		Atu4655	0.37	-1.2
1,810,143	+		Atu4655	0.46	+0.1
1,810,211	+		Atu4655	0.51	-0.0
1,810,219	-		Atu4655	0.52	-0.2
1,810,276	+		Atu4655	0.56	+0.6
1,810,350	+		Atu4655	0.63	-0.2
1,810,358	-		Atu4655	0.63	+1.3
1,810,364	-		Atu4655	0.64	+1.5
1,810,393	+		Atu4655	0.66	-0.2
1,810,401	-		Atu4655	0.67	+1.5
1,810,401	-		Atu4655	0.67	-0.1
1,810,442	-		Atu4655	0.70	+0.7
1,810,465	+		Atu4655	0.72	-2.0
1,810,476	+		Atu4655	0.73	+0.6
1,810,476	+		Atu4655	0.73	-2.7
1,810,484	-		Atu4655	0.73	-0.3
1,810,484	-		Atu4655	0.73	-0.0
1,810,484	-		Atu4655	0.73	-0.2
1,810,585	-		Atu4655	0.82	+1.8
1,810,599	+		Atu4655	0.83	+0.2
1,810,607	-		Atu4655	0.83	-0.3
1,810,649	+		Atu4655	0.87	+0.1
1,810,988	+				+0.2
1,810,996	-				-0.9
1,810,996	-				+1.0
1,811,052	+				+2.6
1,811,059	-				-1.5
1,811,098	+		Atu4656	0.11	-0.4
1,811,106	-		Atu4656	0.12	+1.0
1,811,213	+		Atu4656	0.16	+1.3
1,811,226	-		Atu4656	0.17	+0.9
1,811,228	+		Atu4656	0.17	+0.5
1,811,322	-		Atu4656	0.21	+0.9
1,811,406	-		Atu4656	0.24	-0.0
1,811,509	+		Atu4656	0.28	+0.4
1,811,517	-		Atu4656	0.29	+1.0
1,811,517	-		Atu4656	0.29	-1.4
1,811,534	+		Atu4656	0.29	+0.3
1,811,636	-		Atu4656	0.34	+1.8
1,811,761	+		Atu4656	0.39	-1.0
1,811,810	+		Atu4656	0.41	-1.5
1,811,834	-		Atu4656	0.42	+0.2
1,811,844	+		Atu4656	0.42	-1.8
1,811,844	+		Atu4656	0.42	+0.8
1,811,877	-		Atu4656	0.44	+1.3
1,811,914	+		Atu4656	0.45	-0.8
1,811,956	+		Atu4656	0.47	-0.8
1,811,980	-		Atu4656	0.48	+0.9
1,812,009	-		Atu4656	0.49	+1.8
1,812,159	-		Atu4656	0.55	-1.8
1,812,244	-		Atu4656	0.59	+1.2
1,812,326	+		Atu4656	0.62	+0.8
1,812,342	+		Atu4656	0.63	+2.5
1,812,350	-		Atu4656	0.63	+1.8
1,812,355	+		Atu4656	0.64	-1.0
1,812,363	-		Atu4656	0.64	-0.4
1,812,445	+		Atu4656	0.67	+0.9
1,812,458	-		Atu4656	0.68	-1.2
1,812,593	-		Atu4656	0.73	-0.4
1,812,595	+		Atu4656	0.73	+2.3
1,812,603	-		Atu4656	0.74	-0.1
1,812,864	-		Atu4656	0.85	+0.2
1,812,902	+		Atu4656	0.86	+0.2
1,812,912	-		Atu4656	0.87	-1.2
1,812,971	+		Atu4656	0.89	+1.2
1,812,972	+		Atu4656	0.89	+4.2
1,813,012	-				-1.0
1,813,012	-				+1.4
1,813,029	+				-1.2
1,813,044	+				+1.5
1,813,052	+				-1.0
1,813,143	+				+0.2
1,813,152	+				+1.2
1,813,187	-				-0.2
1,813,187	-				+1.8
1,813,233	-				-0.6
1,813,235	-				-0.2
1,813,294	+				+1.8
1,813,344	+		Atu4657	0.13	-0.2
1,813,358	+		Atu4657	0.14	+0.6
1,813,383	-		Atu4657	0.17	-2.0
1,813,413	-		Atu4657	0.20	+0.2
1,813,442	+		Atu4657	0.23	-0.4
1,813,442	+		Atu4657	0.23	-0.4
1,813,796	-		Atu4657	0.62	+0.8
1,813,806	+		Atu4657	0.63	+0.8
1,813,806	+		Atu4657	0.63	+0.4
1,813,806	+		Atu4657	0.63	-0.0
1,813,813	+		Atu4657	0.64	-0.7
1,813,825	+		Atu4657	0.65	+0.4
1,813,874	+		Atu4657	0.71	+0.0
1,813,891	-		Atu4657	0.73	+0.2
1,813,996	-		Atu4657	0.84	+0.3
1,814,025	+		Atu4657	0.87	-1.4
1,814,110	+				+3.8
1,814,186	+				+1.7
1,814,192	+				-1.8
1,814,200	-				-0.3