Strain Fitness in Agrobacterium fabrum C58 around Atu4626

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,772,729	+				-1.2
1,772,737	-				-3.1
1,772,761	+		Atu4625	0.11	-0.3
1,772,812	+		Atu4625	0.17	-0.1
1,772,859	+		Atu4625	0.21	-1.8
1,772,972	+		Atu4625	0.33	-1.9
1,773,002	+		Atu4625	0.36	-1.7
1,773,056	-		Atu4625	0.41	+0.2
1,773,081	+		Atu4625	0.44	+0.2
1,773,101	-		Atu4625	0.46	+0.0
1,773,190	+		Atu4625	0.55	-1.5
1,773,192	+		Atu4625	0.55	+1.0
1,773,192	+		Atu4625	0.55	-1.4
1,773,200	-		Atu4625	0.56	-0.2
1,773,210	-		Atu4625	0.57	-0.2
1,773,217	+		Atu4625	0.58	+0.3
1,773,217	+		Atu4625	0.58	+1.3
1,773,217	+		Atu4625	0.58	-0.4
1,773,218	-		Atu4625	0.58	-0.4
1,773,232	+		Atu4625	0.59	+0.4
1,773,248	-		Atu4625	0.61	+0.2
1,773,505	+		Atu4625	0.87	+1.3
1,773,582	+				-1.0
1,773,595	+				+0.6
1,773,654	-				+0.3
1,773,743	+				+0.6
1,773,838	+				+0.8
1,773,987	-		Atu4626	0.18	+2.2
1,773,987	-		Atu4626	0.18	-1.2
1,774,135	-		Atu4626	0.27	-0.8
1,774,294	-		Atu4626	0.37	+0.5
1,774,594	-		Atu4626	0.56	+0.2
1,774,658	+		Atu4626	0.60	+0.1
1,774,759	-		Atu4626	0.66	-1.8
1,774,763	+		Atu4626	0.66	-0.2
1,774,807	-		Atu4626	0.69	+0.6
1,774,841	-		Atu4626	0.71	-0.1
1,774,843	+		Atu4626	0.72	-0.3
1,774,843	-		Atu4626	0.72	+0.2
1,774,880	+		Atu4626	0.74	-1.9
1,774,885	+		Atu4626	0.74	+1.1
1,774,903	+		Atu4626	0.75	-2.0
1,774,903	+		Atu4626	0.75	+0.2
1,775,072	-		Atu4626	0.86	-0.7
1,775,072	-		Atu4626	0.86	+0.8
1,775,082	-		Atu4626	0.87	+0.8
1,775,103	-		Atu4626	0.88	+0.7
1,775,110	-		Atu4626	0.88	-0.0
1,775,110	-		Atu4626	0.88	-0.5
1,775,148	+				-0.3
1,775,169	+				-0.2
1,775,309	-				+2.0
1,775,378	+				-1.5
1,775,508	-				-0.5
1,775,508	-				+0.3
1,775,572	+				-1.2
1,775,580	-				+2.3
1,775,583	-				+0.6
1,775,609	-				-1.7
1,775,634	-				-0.4
1,775,836	-				+0.8
1,775,861	+				+0.2
1,775,980	+		Atu4627	0.12	-0.0
1,776,051	-		Atu4627	0.21	+0.8
1,776,288	-		Atu4627	0.50	-0.1