Strain Fitness in Agrobacterium fabrum C58 around Atu4595

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,740,293	+		Atu4593	0.79	+0.9
1,740,314	-		Atu4593	0.81	+2.0
1,740,567	+		Atu4594	0.12	-0.1
1,740,567	+		Atu4594	0.12	+0.8
1,740,567	+		Atu4594	0.12	-0.8
1,740,575	-		Atu4594	0.14	+1.8
1,740,575	-		Atu4594	0.14	-0.5
1,740,575	-		Atu4594	0.14	+0.2
1,740,716	+		Atu4594	0.34	-1.6
1,740,719	-		Atu4594	0.34	+1.2
1,740,757	+		Atu4594	0.40	+0.7
1,740,870	+		Atu4594	0.56	+0.4
1,740,870	-		Atu4594	0.56	-1.0
1,740,870	-		Atu4594	0.56	+0.2
1,740,906	+		Atu4594	0.62	-0.3
1,740,914	-		Atu4594	0.63	-0.3
1,740,930	+		Atu4594	0.65	+0.4
1,740,931	-		Atu4594	0.65	+0.9
1,740,943	+		Atu4594	0.67	+0.6
1,740,956	-		Atu4594	0.69	-2.5
1,740,956	-		Atu4594	0.69	+1.8
1,740,956	-		Atu4594	0.69	-0.6
1,740,956	-		Atu4594	0.69	+1.5
1,740,956	-		Atu4594	0.69	-1.4
1,740,956	-		Atu4594	0.69	-2.5
1,740,984	+		Atu4594	0.73	+0.4
1,741,170	+				+0.3
1,741,212	-				+2.7
1,741,306	+		Atu4595	0.17	+0.3
1,741,311	+		Atu4595	0.18	+1.2
1,741,343	-		Atu4595	0.22	+0.4
1,741,514	-		Atu4595	0.45	+0.2
1,741,591	-		Atu4595	0.55	-0.2
1,741,714	+		Atu4595	0.72	+0.7
1,741,752	+		Atu4595	0.77	+0.5
1,741,950	+				+0.2
1,741,963	-				-1.2
1,741,963	-				-0.3
1,742,072	-				+1.3
1,742,381	+		Atu4596	0.40	-0.3
1,742,458	+		Atu4596	0.48	+1.1
1,742,536	-		Atu4596	0.55	-0.0
1,742,553	+		Atu4596	0.57	-1.9
1,742,571	-		Atu4596	0.59	-0.3
1,742,599	+		Atu4596	0.62	-1.3
1,742,642	+		Atu4596	0.66	-0.1
1,742,650	-		Atu4596	0.67	-0.5
1,742,650	-		Atu4596	0.67	-1.2
1,742,650	-		Atu4596	0.67	+0.8
1,742,738	+		Atu4596	0.76	+1.1
1,742,756	-		Atu4596	0.78	-0.4
1,742,767	+		Atu4596	0.79	+0.2
1,742,767	+		Atu4596	0.79	-1.2
1,742,767	+		Atu4596	0.79	+1.4
1,742,767	+		Atu4596	0.79	-1.3
1,742,775	-		Atu4596	0.80	-0.5
1,742,775	-		Atu4596	0.80	+0.9
1,742,842	+		Atu4596	0.86	+0.3
1,742,887	+				+0.5
1,742,921	+				+0.3
1,742,922	-				+0.8