Strain Fitness in Agrobacterium fabrum C58 around Atu4435

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,577,433	-				-1.5
1,577,438	-				+0.3
1,577,541	+				-2.6
1,577,551	+				-0.6
1,577,551	+				-1.0
1,577,551	+				-3.1
1,577,554	-				-1.7
1,577,559	-				+1.0
1,577,559	-				-0.9
1,577,559	-				-1.1
1,577,574	+		Atu4434	0.10	-0.1
1,577,595	+		Atu4434	0.13	+0.8
1,577,691	-		Atu4434	0.24	-0.8
1,577,716	+		Atu4434	0.27	-1.6
1,577,724	-		Atu4434	0.28	+0.1
1,577,766	-		Atu4434	0.33	-2.2
1,577,893	+		Atu4434	0.48	-1.1
1,577,893	+		Atu4434	0.48	+0.6
1,577,893	-		Atu4434	0.48	+1.4
1,577,928	+		Atu4434	0.52	+0.7
1,578,053	+		Atu4434	0.67	-0.7
1,578,219	-		Atu4434	0.87	-1.9
1,578,219	-		Atu4434	0.87	-0.3
1,578,237	-		Atu4434	0.89	+1.2
1,578,245	+				+0.7
1,578,253	-				+0.5
1,578,321	+				-0.2
1,578,416	-		Atu4435	0.13	-0.8
1,578,500	+		Atu4435	0.24	-1.1
1,578,593	+		Atu4435	0.36	+0.6
1,578,601	-		Atu4435	0.37	-0.3
1,578,695	-		Atu4435	0.50	-2.3
1,579,029	-				+0.0
1,579,113	+				-0.6
1,579,271	-				-0.6
1,579,350	+		Atu4436	0.17	+1.1
1,579,473	-		Atu4436	0.29	-0.5
1,579,493	+		Atu4436	0.31	+2.1
1,579,538	-		Atu4436	0.35	+0.3
1,579,586	+		Atu4436	0.40	-0.3
1,579,599	-		Atu4436	0.41	+0.7
1,579,701	-		Atu4436	0.51	+0.1
1,579,703	+		Atu4436	0.51	-3.6
1,579,711	-		Atu4436	0.52	+0.3
1,579,711	-		Atu4436	0.52	-0.3
1,579,752	-		Atu4436	0.56	+0.6
1,579,767	-		Atu4436	0.57	-0.9
1,579,796	+		Atu4436	0.60	+1.7
1,579,804	-		Atu4436	0.61	-1.7
1,579,809	-		Atu4436	0.61	+0.9
1,579,870	-		Atu4436	0.67	+0.1
1,579,889	-		Atu4436	0.69	-1.1
1,579,946	+		Atu4436	0.75	-1.6