Strain Fitness in Agrobacterium fabrum C58 around Atu4433

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,575,632	+		Atu4432	0.13	+1.2
1,575,648	-		Atu4432	0.14	-0.3
1,575,693	+		Atu4432	0.18	+0.5
1,575,719	+		Atu4432	0.21	-0.4
1,575,788	+		Atu4432	0.27	-1.3
1,575,800	+		Atu4432	0.28	+1.3
1,576,042	-		Atu4432	0.51	-2.6
1,576,197	+		Atu4432	0.66	+0.5
1,576,223	+		Atu4432	0.68	+0.3
1,576,231	-		Atu4432	0.69	+1.7
1,576,314	+		Atu4432	0.77	-0.2
1,576,322	-		Atu4432	0.77	+0.7
1,576,353	+		Atu4432	0.80	-0.9
1,576,353	+		Atu4432	0.80	+0.1
1,576,353	+		Atu4432	0.80	-0.4
1,576,353	+		Atu4432	0.80	-0.5
1,576,353	+		Atu4432	0.80	+0.2
1,576,361	-		Atu4432	0.81	-0.6
1,576,361	-		Atu4432	0.81	-1.9
1,576,361	-		Atu4432	0.81	-0.9
1,576,361	-		Atu4432	0.81	-1.9
1,576,361	-		Atu4432	0.81	+0.2
1,576,361	-		Atu4432	0.81	-1.0
1,576,361	-		Atu4432	0.81	-0.5
1,576,361	-		Atu4432	0.81	+1.6
1,576,361	-		Atu4432	0.81	-1.1
1,576,361	-		Atu4432	0.81	-0.4
1,576,366	-		Atu4432	0.81	-0.3
1,576,389	-		Atu4432	0.84	-1.9
1,576,520	-				+0.7
1,576,541	+				-1.1
1,576,549	-				-1.5
1,576,587	+				+0.6
1,576,587	+				-0.3
1,576,595	-				-1.9
1,576,697	+		Atu4433	0.15	-1.7
1,576,732	-		Atu4433	0.18	-0.9
1,576,805	+		Atu4433	0.26	-0.6
1,576,815	+		Atu4433	0.27	+0.3
1,576,907	-		Atu4433	0.37	-2.1
1,576,953	-		Atu4433	0.42	+0.0
1,576,958	-		Atu4433	0.43	-1.7
1,576,968	+		Atu4433	0.44	+0.4
1,576,972	+		Atu4433	0.44	-0.9
1,577,079	+		Atu4433	0.56	-1.1
1,577,185	-		Atu4433	0.67	+0.7
1,577,188	-		Atu4433	0.67	+1.6
1,577,267	+		Atu4433	0.76	+0.2
1,577,269	-		Atu4433	0.76	+1.7
1,577,272	+		Atu4433	0.76	-2.4
1,577,433	-				-1.5
1,577,438	-				+0.3
1,577,541	+				-2.6
1,577,551	+				-0.6
1,577,551	+				-1.0
1,577,551	+				-3.1
1,577,554	-				-1.7
1,577,559	-				+1.0
1,577,559	-				-0.9
1,577,559	-				-1.1
1,577,574	+		Atu4434	0.10	-0.1
1,577,595	+		Atu4434	0.13	+0.8
1,577,691	-		Atu4434	0.24	-0.8
1,577,716	+		Atu4434	0.27	-1.6
1,577,724	-		Atu4434	0.28	+0.1
1,577,766	-		Atu4434	0.33	-2.2
1,577,893	+		Atu4434	0.48	-1.1
1,577,893	+		Atu4434	0.48	+0.6
1,577,893	-		Atu4434	0.48	+1.4
1,577,928	+		Atu4434	0.52	+0.7
1,578,053	+		Atu4434	0.67	-0.7
1,578,219	-		Atu4434	0.87	-1.9
1,578,219	-		Atu4434	0.87	-0.3
1,578,237	-		Atu4434	0.89	+1.2
1,578,245	+				+0.7
1,578,253	-				+0.5
1,578,321	+				-0.2
1,578,416	-		Atu4435	0.13	-0.8