Strain Fitness in Agrobacterium fabrum C58 around Atu4354

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,488,191	+		Atu4353	0.70	-1.1
1,488,221	+		Atu4353	0.72	+0.8
1,488,369	-		Atu4353	0.80	-1.0
1,488,374	-		Atu4353	0.80	+0.6
1,488,406	-		Atu4353	0.82	-0.1
1,488,452	-		Atu4353	0.85	-0.6
1,488,521	-		Atu4353	0.88	-0.6
1,488,521	-		Atu4353	0.88	+0.5
1,488,604	-				-0.3
1,488,628	-				-0.1
1,488,650	+				-0.1
1,488,658	-				-0.2
1,488,698	+				+0.3
1,488,754	+				-0.1
1,488,762	-				-0.8
1,488,762	-				-0.3
1,488,767	-				+0.5
1,488,807	-				+0.0
1,489,068	+				-0.6
1,489,083	+				+0.7
1,489,110	+				+0.6
1,489,247	-				-0.7
1,489,419	+		Atu4354	0.19	+0.4
1,489,425	-		Atu4354	0.19	-0.7
1,489,427	-		Atu4354	0.19	-2.2
1,489,513	+		Atu4354	0.25	-1.2
1,489,595	-		Atu4354	0.29	-0.7
1,489,641	+		Atu4354	0.32	-1.3
1,489,649	+		Atu4354	0.33	-1.0
1,489,649	+		Atu4354	0.33	+0.2
1,489,649	+		Atu4354	0.33	-2.4
1,489,700	+		Atu4354	0.36	-0.4
1,489,734	+		Atu4354	0.38	+3.5
1,489,864	+		Atu4354	0.46	+0.7
1,489,879	-		Atu4354	0.46	-0.1
1,489,887	-		Atu4354	0.47	-2.2
1,489,913	-		Atu4354	0.48	+0.6
1,489,923	+		Atu4354	0.49	+0.5
1,489,926	-		Atu4354	0.49	-0.5
1,489,931	-		Atu4354	0.50	-0.1
1,490,046	-		Atu4354	0.56	+0.4
1,490,129	-		Atu4354	0.61	-0.2
1,490,146	-		Atu4354	0.62	-2.6
1,490,246	-		Atu4354	0.68	+1.4
1,490,247	+		Atu4354	0.68	-2.0
1,490,286	+		Atu4354	0.71	-0.3
1,490,417	+		Atu4354	0.79	+0.5
1,490,522	-		Atu4354	0.85	-0.7
1,490,539	-		Atu4354	0.86	-1.2
1,490,968	-		Atu4355	0.12	-0.7
1,491,015	-		Atu4355	0.15	+0.3
1,491,043	-		Atu4355	0.17	-0.8
1,491,095	-		Atu4355	0.20	+0.2
1,491,108	+		Atu4355	0.21	-0.8
1,491,115	-		Atu4355	0.22	-0.6
1,491,164	-		Atu4355	0.25	-1.3
1,491,208	-		Atu4355	0.28	+0.9
1,491,392	-		Atu4355	0.39	-1.0
1,491,446	+		Atu4355	0.43	-0.1
1,491,446	+		Atu4355	0.43	+2.7
1,491,446	+		Atu4355	0.43	+0.5
1,491,494	+		Atu4355	0.46	+1.1
1,491,521	-		Atu4355	0.48	-1.9
1,491,521	-		Atu4355	0.48	+0.0
1,491,736	+		Atu4355	0.62	+0.4
1,491,744	-		Atu4355	0.62	-0.4