Strain Fitness in Agrobacterium fabrum C58 around Atu4283

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,406,450	+		Atu4281	0.75	-0.5
1,406,538	+		Atu4281	0.87	+1.1
1,406,546	-		Atu4281	0.88	-0.7
1,406,594	-				+0.1
1,406,606	+				+1.3
1,406,606	+				+1.9
1,406,606	+				+0.2
1,406,607	+				-0.9
1,406,614	-				+0.2
1,406,640	+				+2.0
1,406,661	-				+0.5
1,406,827	+		Atu4282	0.27	-0.4
1,406,835	-		Atu4282	0.28	-1.3
1,406,835	-		Atu4282	0.28	-0.3
1,406,867	-		Atu4282	0.32	-0.9
1,406,890	+		Atu4282	0.35	+1.7
1,406,909	-		Atu4282	0.38	+0.1
1,406,948	+		Atu4282	0.43	+0.9
1,406,982	-		Atu4282	0.47	-0.6
1,407,008	-		Atu4282	0.51	-1.9
1,407,087	+		Atu4282	0.61	-1.5
1,407,137	+		Atu4282	0.68	+1.3
1,407,164	+		Atu4282	0.71	-0.2
1,407,172	-		Atu4282	0.72	+0.0
1,407,172	-		Atu4282	0.72	+0.7
1,407,172	-		Atu4282	0.72	+0.1
1,407,239	-		Atu4282	0.81	+0.9
1,407,246	+		Atu4282	0.82	-0.9
1,407,254	-		Atu4282	0.83	+0.4
1,407,344	+				+0.1
1,407,457	-		Atu4283	0.10	+1.1
1,407,495	+		Atu4283	0.15	+1.1
1,407,663	-		Atu4283	0.37	-2.0
1,407,671	+		Atu4283	0.38	+0.9
1,407,671	+		Atu4283	0.38	+0.7
1,407,708	-		Atu4283	0.43	-3.1
1,407,785	-		Atu4283	0.53	-1.1
1,407,785	-		Atu4283	0.53	+0.3
1,407,846	-		Atu4283	0.61	+0.7
1,407,880	-		Atu4283	0.65	+0.3
1,407,880	-		Atu4283	0.65	-0.3
1,407,909	-		Atu4283	0.69	-0.7
1,407,911	-		Atu4283	0.70	+0.8
1,407,972	+		Atu4283	0.78	-0.6
1,407,973	+		Atu4283	0.78	+2.0
1,407,987	+		Atu4283	0.79	+0.2
1,407,995	-		Atu4283	0.81	+1.1
1,408,078	+				+0.1
1,408,187	+				+0.1
1,408,187	+				-1.6
1,408,187	+				-0.9
1,408,187	+				-0.1
1,408,195	-				-0.7
1,408,207	+				+3.5
1,408,207	+				-2.5
1,408,207	+				-1.3
1,408,266	+		Atu4284	0.11	-0.3
1,408,273	+		Atu4284	0.12	-1.0
1,408,286	-		Atu4284	0.13	+1.1
1,408,308	-		Atu4284	0.16	+0.5
1,408,362	+		Atu4284	0.22	+1.3
1,408,370	-		Atu4284	0.23	-0.1
1,408,401	+		Atu4284	0.27	+1.4
1,408,401	+		Atu4284	0.27	-2.3
1,408,401	+		Atu4284	0.27	-0.1
1,408,401	+		Atu4284	0.27	-0.5
1,408,409	-		Atu4284	0.28	+0.6
1,408,417	+		Atu4284	0.29	-0.2
1,408,498	+		Atu4284	0.39	-0.7
1,408,498	-		Atu4284	0.39	+0.8
1,408,656	+		Atu4284	0.58	-1.8
1,408,656	+		Atu4284	0.58	+0.3
1,408,733	-		Atu4284	0.67	-0.1
1,408,733	-		Atu4284	0.67	+0.7
1,408,892	-		Atu4284	0.86	-1.7
1,408,910	-		Atu4284	0.88	+0.3
1,408,926	+		Atu4284	0.90	-1.1
1,408,966	-				+0.2
1,409,004	+				-0.8
1,409,004	+				+0.2
1,409,139	-				+1.9