Strain Fitness in Agrobacterium fabrum C58 around Atu3177

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
186,394	+				+1.4
186,407	+				+0.7
186,523	+		Atu3176	0.13	-1.6
186,523	+		Atu3176	0.13	-1.9
186,525	-		Atu3176	0.13	-1.0
186,531	-		Atu3176	0.14	+0.1
186,584	+		Atu3176	0.21	-2.7
186,584	-		Atu3176	0.21	+0.8
186,592	-		Atu3176	0.22	+1.0
186,623	-		Atu3176	0.27	-1.0
186,700	-		Atu3176	0.37	-0.7
186,700	-		Atu3176	0.37	+0.1
186,761	+		Atu3176	0.46	-1.2
186,769	+		Atu3176	0.47	-1.3
186,803	+		Atu3176	0.52	-0.3
186,831	+		Atu3176	0.56	+0.3
186,837	-		Atu3176	0.56	+0.5
186,994	+		Atu3176	0.78	-3.2
187,052	-		Atu3176	0.86	+1.8
187,058	+		Atu3176	0.87	+0.1
187,089	-				-0.7
187,143	+				-0.5
187,151	-				-0.2
187,151	-				-0.7
187,151	-				+1.3
187,438	+		Atu3177	0.15	-1.6
187,439	-		Atu3177	0.16	-0.0
187,458	+		Atu3177	0.20	-0.3
187,597	+		Atu3177	0.49	-1.5
187,634	-		Atu3177	0.57	+0.3
187,638	-		Atu3177	0.58	-0.0
187,668	-		Atu3177	0.64	-0.9
187,796	+				-1.5
187,826	-				+0.2
187,970	-				-1.0
187,989	-				+0.8
187,989	-				-0.5
188,000	-				-0.2
188,059	+				-1.3
188,067	-				+0.0
188,120	+		Atu3178	0.11	-0.1
188,133	-		Atu3178	0.12	-0.7
188,134	-		Atu3178	0.12	-1.3
188,139	-		Atu3178	0.13	-0.4
188,207	-		Atu3178	0.20	-0.1
188,207	-		Atu3178	0.20	+0.2
188,495	+		Atu3178	0.48	-0.8
188,503	-		Atu3178	0.49	+0.4
188,691	+		Atu3178	0.67	-0.8
188,699	-		Atu3178	0.68	-0.8
188,699	-		Atu3178	0.68	+0.8
188,699	-		Atu3178	0.68	+1.3
188,777	-		Atu3178	0.76	-1.0