Strain Fitness in Agrobacterium fabrum C58 around Atu3099

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
105,219	+				-1.3
105,295	+				+0.2
105,295	+				+1.8
105,295	+				-0.5
105,303	-				-0.0
105,315	-				-0.4
105,343	-				+0.4
105,389	-		Atu3098	0.12	+0.8
105,399	+		Atu3098	0.13	+1.0
105,399	+		Atu3098	0.13	-1.5
105,420	-		Atu3098	0.16	-0.5
105,420	-		Atu3098	0.16	-0.5
105,422	-		Atu3098	0.16	-0.2
105,498	-		Atu3098	0.25	-0.8
105,498	-		Atu3098	0.25	-0.8
105,600	+		Atu3098	0.36	-1.9
105,649	+		Atu3098	0.42	+0.1
105,649	+		Atu3098	0.42	-0.3
105,657	-		Atu3098	0.43	-0.5
105,657	-		Atu3098	0.43	+0.5
105,657	-		Atu3098	0.43	+0.2
105,695	-		Atu3098	0.47	+0.1
105,716	-		Atu3098	0.49	-0.2
105,716	-		Atu3098	0.49	-2.3
105,733	-		Atu3098	0.51	-0.5
105,757	+		Atu3098	0.54	+0.7
105,958	+		Atu3098	0.77	+0.1
105,975	+		Atu3098	0.79	-1.3
106,014	-		Atu3098	0.83	-0.4
106,179	-				+0.6
106,247	+				-0.3
106,257	+				-0.8
106,257	+				-0.8
106,265	-				+1.2
106,347	+		Atu3099	0.13	-0.1
106,393	+		Atu3099	0.18	-0.8
106,401	+		Atu3099	0.18	+2.4
106,409	-		Atu3099	0.19	+0.6
106,427	+		Atu3099	0.21	+0.3
106,580	-		Atu3099	0.34	+1.1
106,622	+		Atu3099	0.38	+1.4
106,630	-		Atu3099	0.39	+0.3
106,678	+		Atu3099	0.43	-1.5
106,678	+		Atu3099	0.43	+1.0
106,689	+		Atu3099	0.44	+1.1
106,817	+		Atu3099	0.55	+0.7
106,822	+		Atu3099	0.56	+0.5
106,830	-		Atu3099	0.57	+0.5
106,879	-		Atu3099	0.61	-1.6
106,952	-		Atu3099	0.67	+0.8
106,981	-		Atu3099	0.70	+0.4
107,034	+		Atu3099	0.75	-0.3
107,055	+		Atu3099	0.77	-0.2
107,125	+		Atu3099	0.83	-1.3
107,165	+		Atu3099	0.86	-1.9
107,207	-				-0.7
107,312	+				+0.1
107,337	-				+0.2
107,383	-				-0.2
107,394	-				+0.2
107,404	-				-0.1
107,446	+				-1.9
107,539	+		Atu3100	0.18	-0.1
107,600	+		Atu3100	0.25	-2.6
107,659	-		Atu3100	0.32	+0.2
107,780	-		Atu3100	0.47	-0.2
107,817	+		Atu3100	0.52	+1.7
107,859	-		Atu3100	0.57	+2.1
107,859	-		Atu3100	0.57	+0.0
107,874	+		Atu3100	0.58	-1.0
107,935	+		Atu3100	0.66	+0.2
108,089	+		Atu3100	0.84	+1.5
108,129	+		Atu3100	0.89	-0.1
108,129	+		Atu3100	0.89	+1.4
108,137	-				+0.8
108,147	+				+1.2
108,187	-				-0.0
108,215	+				+2.2
108,220	-				+1.1
108,232	-				+1.8