Strain Fitness in Agrobacterium fabrum C58 around Atu3038

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
31,006	+				+0.2
31,099	-				+0.6
31,104	-				-0.0
31,131	-				+1.1
31,231	-		Atu3037	0.19	-1.0
31,342	-		Atu3037	0.31	-0.2
31,379	+		Atu3037	0.35	+0.4
31,402	+		Atu3037	0.38	-0.4
31,405	-		Atu3037	0.38	+0.2
31,587	+		Atu3037	0.59	+0.3
31,669	+		Atu3037	0.68	+1.1
31,718	-		Atu3037	0.74	-0.2
31,718	-		Atu3037	0.74	+1.5
31,718	-		Atu3037	0.74	+3.2
31,764	-		Atu3037	0.79	-0.5
31,793	+		Atu3037	0.82	+0.8
31,800	-		Atu3037	0.83	-0.2
31,801	-		Atu3037	0.83	-0.1
31,857	+		Atu3037	0.90	+0.5
31,862	+				-0.8
31,865	-				-0.5
31,870	-				+0.2
31,873	+				+1.8
31,873	+				+1.3
31,895	+				+1.8
31,956	-				+2.3
31,961	-				+0.9
32,008	-				-0.7
32,021	+				+1.3
32,029	-				+1.0
32,088	-				-0.2
32,156	-		Atu3038	0.12	-1.3
32,172	+		Atu3038	0.13	+1.3
32,244	-		Atu3038	0.18	-0.5
32,338	+		Atu3038	0.23	-1.3
32,372	+		Atu3038	0.26	-1.0
32,380	-		Atu3038	0.26	-1.8
32,390	-		Atu3038	0.27	-2.6
32,415	-		Atu3038	0.28	+0.2
32,459	-		Atu3038	0.31	-1.2
32,601	-		Atu3038	0.39	-0.8
32,612	+		Atu3038	0.40	+0.8
32,661	-		Atu3038	0.43	+2.2
32,676	-		Atu3038	0.44	+0.5
32,686	-		Atu3038	0.45	+1.8
32,688	+		Atu3038	0.45	+0.5
32,731	+		Atu3038	0.47	-0.7
33,057	+		Atu3038	0.67	+1.4
33,207	-		Atu3038	0.76	-1.2
33,218	-		Atu3038	0.77	-1.0
33,414	+		Atu3038	0.89	-1.9
33,437	+				-0.8
33,490	-				-0.3
33,535	-				+0.8
33,725	-				-0.2
33,740	-				-0.2
33,749	+				+0.5
33,773	-		Atu3039	0.10	+0.8
33,946	+		Atu3039	0.21	+0.4
33,946	+		Atu3039	0.21	-1.1
33,953	+		Atu3039	0.22	-1.2
34,103	-		Atu3039	0.31	-0.4
34,153	+		Atu3039	0.35	-0.8
34,260	+		Atu3039	0.41	+0.2
34,299	+		Atu3039	0.44	+0.4
34,317	-		Atu3039	0.45	-0.8
34,337	-		Atu3039	0.46	+2.1
34,350	+		Atu3039	0.47	-0.5
34,353	-		Atu3039	0.47	+0.9
34,407	+		Atu3039	0.51	+0.1
34,415	-		Atu3039	0.51	-0.5
34,418	-		Atu3039	0.52	-2.3
34,567	+		Atu3039	0.61	+1.8
34,575	-		Atu3039	0.62	+0.8