Strain Fitness in Agrobacterium fabrum C58 around Atu2784

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
2,787,616	+		Atu2782	0.60	+0.7
2,787,628	+		Atu2782	0.62	-1.2
2,787,629	+		Atu2782	0.63	+0.3
2,787,633	+		Atu2782	0.63	-0.4
2,787,641	-		Atu2782	0.65	-2.3
2,787,665	-		Atu2782	0.69	-0.5
2,787,785	+		Atu2782	0.89	-0.5
2,787,785	+		Atu2782	0.89	+0.4
2,787,808	+				-0.6
2,787,816	-				-0.3
2,788,112	+		Atu2783	0.42	+1.3
2,788,112	+		Atu2783	0.42	+0.6
2,788,120	-		Atu2783	0.43	-2.0
2,788,120	-		Atu2783	0.43	+0.7
2,788,234	+		Atu2783	0.61	-0.8
2,788,242	-		Atu2783	0.63	+1.8
2,788,331	+		Atu2783	0.77	-1.2
2,788,339	-		Atu2783	0.78	+1.8
2,788,339	-		Atu2783	0.78	-0.4
2,788,386	+		Atu2783	0.85	+2.0
2,788,428	-				-0.7
2,788,428	-				+0.4
2,788,480	+				+1.3
2,788,488	-				-0.8
2,788,488	-				-1.7
2,788,488	-				-1.1
2,788,488	-				+1.4
2,788,569	-				+0.7
2,789,466	+				+0.4
2,789,574	+				-1.2
2,789,574	+				-0.7
2,789,587	-				-0.4
2,789,654	-		Atu2786	0.20	+0.1
2,789,693	-		Atu2786	0.29	+0.4
2,789,764	-		Atu2786	0.45	-0.9
2,789,776	+		Atu2786	0.47	-1.9