Strain Fitness in Agrobacterium fabrum C58 around Atu2762
Experiment: Chloramphenicol 12.5 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 12.5 ug/mL |
---|---|---|---|---|---|
remove | |||||
2,762,730 | + | +1.5 | |||
2,762,810 | + | -1.2 | |||
2,762,956 | + | Atu2761 | 0.20 | -0.4 | |
2,763,060 | + | Atu2761 | 0.32 | +0.7 | |
2,763,206 | - | Atu2761 | 0.51 | +0.3 | |
2,763,376 | - | Atu2761 | 0.72 | -1.5 | |
2,763,399 | - | Atu2761 | 0.75 | +0.7 | |
2,763,493 | - | Atu2761 | 0.86 | +0.3 | |
2,763,756 | - | Atu2762 | 0.30 | -0.2 | |
2,763,855 | + | Atu2762 | 0.52 | +0.8 | |
2,763,865 | + | Atu2762 | 0.54 | -0.7 | |
2,763,888 | - | Atu2762 | 0.59 | -0.9 | |
2,763,978 | - | Atu2762 | 0.79 | +0.3 | |
2,764,042 | - | +0.8 | |||
2,764,042 | - | +0.1 | |||
2,764,049 | + | -1.2 | |||
2,764,062 | + | -0.4 | |||
2,764,075 | - | +0.6 |
Or see this region's nucleotide sequence