Strain Fitness in Agrobacterium fabrum C58 around Atu2716

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
2,699,946	+		Atu2714	0.76	-0.7
2,699,975	+		Atu2714	0.79	+0.1
2,699,993	-		Atu2714	0.80	-1.6
2,700,094	+				+2.9
2,700,094	+				-0.2
2,700,108	+				-0.6
2,700,116	-				-0.7
2,700,116	-				-0.7
2,700,118	+				-1.2
2,700,126	-				-4.2
2,700,225	-				+0.4
2,700,231	+				-1.2
2,700,231	+				-2.5
2,700,231	+				+1.2
2,700,231	+				-0.4
2,700,239	-				-3.0
2,700,239	-				-1.9
2,700,239	-				-1.2
2,700,239	-				+0.5
2,700,239	-				+0.2
2,700,258	+				+1.4
2,700,314	+				+0.1
2,700,314	+				+0.1
2,700,384	+				-0.2
2,700,384	+				-1.2
2,700,384	+				-0.5
2,700,392	-				-0.9
2,700,392	-				+0.8
2,700,444	-		Atu2715	0.15	+0.7
2,700,518	-		Atu2715	0.34	-0.2
2,700,565	+		Atu2715	0.46	+0.8
2,700,565	-		Atu2715	0.46	+2.1
2,700,566	-		Atu2715	0.46	+0.4
2,700,660	+		Atu2715	0.70	-0.2
2,700,662	+		Atu2715	0.70	+0.4
2,700,670	-		Atu2715	0.72	-2.4
2,700,832	+				+1.8
2,700,851	-				+0.2
2,700,851	-				+0.7
2,700,879	+				-1.9
2,700,908	+				-0.5
2,700,916	-				-2.8
2,701,015	+				-2.2
2,701,023	-				-2.8
2,701,082	-		Atu2716	0.11	-2.6
2,701,111	+		Atu2716	0.13	-1.4
2,701,204	+		Atu2716	0.18	-2.9
2,701,204	+		Atu2716	0.18	-1.4
2,701,204	+		Atu2716	0.18	-1.6
2,701,204	+		Atu2716	0.18	+0.8
2,701,214	+		Atu2716	0.19	-1.4
2,701,519	+		Atu2716	0.35	-2.6
2,701,604	+		Atu2716	0.40	-1.7
2,701,680	+		Atu2716	0.44	-1.6
2,701,733	-		Atu2716	0.47	-1.2
2,701,738	+		Atu2716	0.47	-2.9
2,701,784	+		Atu2716	0.50	-0.6
2,701,825	+		Atu2716	0.52	+0.3
2,701,833	-		Atu2716	0.52	-3.2
2,701,833	-		Atu2716	0.52	+0.4
2,701,844	-		Atu2716	0.53	-2.7
2,701,855	+		Atu2716	0.54	-0.4
2,701,889	+		Atu2716	0.55	-2.7
2,701,939	+		Atu2716	0.58	-0.5
2,702,029	+		Atu2716	0.63	-1.9
2,702,072	-		Atu2716	0.65	-2.8
2,702,134	-		Atu2716	0.69	-0.8
2,702,141	+		Atu2716	0.69	-1.2
2,702,188	+		Atu2716	0.72	-3.0
2,702,196	-		Atu2716	0.72	-2.3
2,702,211	-		Atu2716	0.73	-3.3
2,702,217	+		Atu2716	0.73	-1.8
2,702,249	+		Atu2716	0.75	-2.4
2,702,250	+		Atu2716	0.75	+0.4
2,702,257	-		Atu2716	0.76	-1.6
2,702,373	+		Atu2716	0.82	-1.2
2,702,376	-		Atu2716	0.82	-1.7
2,702,392	-		Atu2716	0.83	-2.7
2,702,442	+		Atu2716	0.86	-1.7
2,702,442	+		Atu2716	0.86	-2.4
2,702,450	-		Atu2716	0.86	-2.3
2,702,450	-		Atu2716	0.86	-1.2
2,702,452	-		Atu2716	0.86	-2.7
2,702,551	-				-1.4
2,702,554	+				-1.3
2,702,591	+				-3.6
2,702,599	-				-1.4
2,702,599	-				+0.2
2,702,620	+				+0.4
2,702,628	-				-3.7
2,702,712	-				-2.4
2,702,721	+				+0.2
2,702,721	+				-0.9
2,702,721	+				-2.0
2,702,721	+				-1.2
2,702,721	+				-2.0
2,702,729	-				-1.2
2,702,729	-				-0.6
2,703,407	+				+0.4