Strain Fitness in Agrobacterium fabrum C58 around Atu2518

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
2,485,577	+				+0.5
2,485,585	-				-3.1
2,485,610	+				-0.1
2,485,610	-				-1.8
2,485,623	-				-1.1
2,485,711	-		Atu2517	0.18	-1.1
2,485,726	+		Atu2517	0.19	-0.7
2,485,729	-		Atu2517	0.20	-2.6
2,485,734	-		Atu2517	0.20	-2.5
2,485,752	-		Atu2517	0.22	-3.2
2,485,765	+		Atu2517	0.23	-1.0
2,485,848	-		Atu2517	0.31	-2.2
2,485,864	-		Atu2517	0.33	-0.6
2,485,925	+		Atu2517	0.39	-0.6
2,485,933	-		Atu2517	0.40	-1.6
2,486,073	-		Atu2517	0.53	+0.9
2,486,088	-		Atu2517	0.55	+1.9
2,486,103	+		Atu2517	0.56	-3.4
2,486,115	-		Atu2517	0.57	+2.5
2,486,173	-		Atu2517	0.63	-1.1
2,486,173	-		Atu2517	0.63	-1.2
2,486,176	+		Atu2517	0.63	-0.2
2,486,179	+		Atu2517	0.64	-1.4
2,486,214	+		Atu2517	0.67	-0.0
2,486,314	+		Atu2517	0.77	-1.9
2,486,322	-		Atu2517	0.78	+0.3
2,486,358	-		Atu2517	0.81	-0.3
2,486,443	+		Atu2517	0.90	+0.3
2,486,443	+		Atu2517	0.90	-1.1
2,486,451	-				-2.0
2,486,500	+				-1.1
2,486,505	+				-0.9
2,486,545	-				+1.1
2,486,596	+				+1.6
2,486,613	+				-0.4
2,486,684	+				+1.5
2,486,739	+		Atu2518	0.12	-0.3
2,486,852	-		Atu2518	0.19	+0.1
2,486,913	+		Atu2518	0.23	-1.2
2,486,956	+		Atu2518	0.26	-1.0
2,487,001	+		Atu2518	0.29	+0.0
2,487,006	+		Atu2518	0.29	+0.5
2,487,006	+		Atu2518	0.29	-1.4
2,487,009	-		Atu2518	0.29	-2.3
2,487,014	-		Atu2518	0.29	-1.3
2,487,014	-		Atu2518	0.29	+0.1
2,487,014	-		Atu2518	0.29	-0.3
2,487,103	+		Atu2518	0.35	-1.4
2,487,211	-		Atu2518	0.42	-0.1
2,487,225	+		Atu2518	0.43	-0.9
2,487,333	+		Atu2518	0.49	-0.9
2,487,333	-		Atu2518	0.49	-0.9
2,487,341	-		Atu2518	0.50	-1.2
2,487,341	-		Atu2518	0.50	-3.1
2,487,380	-		Atu2518	0.52	-1.3
2,487,422	+		Atu2518	0.55	-0.8
2,487,436	+		Atu2518	0.56	+0.4
2,487,451	+		Atu2518	0.57	-0.9
2,487,496	+		Atu2518	0.60	-2.0
2,487,504	-		Atu2518	0.60	-0.9
2,487,584	-		Atu2518	0.65	+1.3
2,487,814	+		Atu2518	0.79	-1.1
2,487,814	+		Atu2518	0.79	-0.1
2,487,857	+		Atu2518	0.82	-0.1
2,487,862	+		Atu2518	0.82	+1.1
2,487,872	-		Atu2518	0.83	-0.5
2,487,885	+		Atu2518	0.84	-1.5
2,487,893	-		Atu2518	0.84	-1.7
2,487,893	-		Atu2518	0.84	+0.3
2,487,898	-		Atu2518	0.85	-1.3
2,487,907	+		Atu2518	0.85	-0.1
2,488,000	-				-1.7
2,488,003	+				-0.1
2,488,003	+				-2.4
2,488,011	-				-0.5
2,488,088	+				-0.5
2,488,178	+				+1.3
2,488,304	-				-0.2
2,488,309	-				-1.3
2,488,362	-				+0.5
2,488,362	-				-2.2
2,488,490	-		Atu2519	0.11	+3.5
2,488,509	-		Atu2519	0.13	-2.4
2,488,539	+		Atu2519	0.15	-0.9
2,488,557	-		Atu2519	0.17	-0.9
2,488,673	+		Atu2519	0.28	+1.1
2,488,690	-		Atu2519	0.30	-1.7
2,488,692	-		Atu2519	0.30	+0.1
2,488,700	-		Atu2519	0.31	+1.5
2,488,816	+		Atu2519	0.42	-2.1
2,488,837	+		Atu2519	0.44	-0.9
2,488,837	+		Atu2519	0.44	-3.3
2,488,837	+		Atu2519	0.44	-0.5
2,488,909	+		Atu2519	0.51	+2.0
2,488,909	+		Atu2519	0.51	-2.7
2,488,917	-		Atu2519	0.52	+0.4
2,488,941	+		Atu2519	0.54	-0.5
2,489,018	+		Atu2519	0.61	+0.3
2,489,021	-		Atu2519	0.62	-0.9
2,489,021	-		Atu2519	0.62	+0.8
2,489,051	+		Atu2519	0.65	-0.9
2,489,061	+		Atu2519	0.66	+1.0
2,489,061	+		Atu2519	0.66	-1.5