Strain Fitness in Agrobacterium fabrum C58 around Atu2516

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
2,483,640	-		Atu2514	0.78	-1.9
2,483,674	-		Atu2514	0.83	-1.5
2,483,674	-		Atu2514	0.83	-0.2
2,483,843	-				-0.2
2,483,888	+		Atu2515	0.11	+0.3
2,483,896	-		Atu2515	0.12	-0.7
2,483,929	-		Atu2515	0.16	+0.7
2,483,938	+		Atu2515	0.17	-0.5
2,484,122	-		Atu2515	0.39	-0.3
2,484,164	-		Atu2515	0.44	-2.3
2,484,195	-		Atu2515	0.48	-2.0
2,484,408	-		Atu2515	0.74	+0.4
2,484,411	+		Atu2515	0.74	-0.9
2,484,460	-		Atu2515	0.80	-0.8
2,484,663	+				-0.5
2,484,663	+				-1.1
2,484,870	+		Atu2516	0.26	-1.3
2,484,889	+		Atu2516	0.29	-0.1
2,484,892	-		Atu2516	0.29	+1.5
2,484,907	+		Atu2516	0.31	+1.7
2,484,972	-		Atu2516	0.38	-1.5
2,485,008	-		Atu2516	0.42	-0.4
2,485,038	-		Atu2516	0.45	-1.3
2,485,042	+		Atu2516	0.46	-0.7
2,485,183	+		Atu2516	0.61	-1.6
2,485,260	+		Atu2516	0.70	-2.1
2,485,425	+		Atu2516	0.88	-1.0
2,485,437	+		Atu2516	0.89	-0.0
2,485,484	-				-2.6
2,485,577	+				+0.5
2,485,585	-				-3.1
2,485,610	+				-0.1
2,485,610	-				-1.8
2,485,623	-				-1.1
2,485,711	-		Atu2517	0.18	-1.1
2,485,726	+		Atu2517	0.19	-0.7
2,485,729	-		Atu2517	0.20	-2.6
2,485,734	-		Atu2517	0.20	-2.5
2,485,752	-		Atu2517	0.22	-3.2
2,485,765	+		Atu2517	0.23	-1.0
2,485,848	-		Atu2517	0.31	-2.2
2,485,864	-		Atu2517	0.33	-0.6
2,485,925	+		Atu2517	0.39	-0.6
2,485,933	-		Atu2517	0.40	-1.6
2,486,073	-		Atu2517	0.53	+0.9
2,486,088	-		Atu2517	0.55	+1.9
2,486,103	+		Atu2517	0.56	-3.4
2,486,115	-		Atu2517	0.57	+2.5
2,486,173	-		Atu2517	0.63	-1.1
2,486,173	-		Atu2517	0.63	-1.2
2,486,176	+		Atu2517	0.63	-0.2
2,486,179	+		Atu2517	0.64	-1.4
2,486,214	+		Atu2517	0.67	-0.0
2,486,314	+		Atu2517	0.77	-1.9
2,486,322	-		Atu2517	0.78	+0.3
2,486,358	-		Atu2517	0.81	-0.3
2,486,443	+		Atu2517	0.90	+0.3
2,486,443	+		Atu2517	0.90	-1.1
2,486,451	-				-2.0
2,486,500	+				-1.1
2,486,505	+				-0.9