Strain Fitness in Agrobacterium fabrum C58 around Atu2476

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
2,443,541	-				+1.4
2,443,559	+				-0.0
2,443,651	+				-0.7
2,443,651	+				+0.6
2,443,651	+				-0.6
2,443,658	+		Atu2475	0.10	-2.0
2,443,746	-		Atu2475	0.20	+0.3
2,443,748	+		Atu2475	0.20	+0.2
2,443,817	+		Atu2475	0.27	+2.2
2,443,835	-		Atu2475	0.29	-2.8
2,443,979	+		Atu2475	0.44	-0.5
2,443,979	+		Atu2475	0.44	+0.5
2,444,043	-		Atu2475	0.50	-0.5
2,444,126	+		Atu2475	0.59	-1.0
2,444,146	+		Atu2475	0.61	-0.1
2,444,485	-				-1.8
2,444,497	+				-0.6
2,444,532	-				-0.5
2,444,543	+				+0.8
2,444,650	+		Atu2476	0.17	-0.6
2,444,658	-		Atu2476	0.18	-1.5
2,444,683	+		Atu2476	0.21	+0.3
2,444,706	+		Atu2476	0.24	-1.3
2,444,706	+		Atu2476	0.24	-0.4
2,444,706	+		Atu2476	0.24	+0.4
2,444,706	+		Atu2476	0.24	-0.2
2,444,714	-		Atu2476	0.25	-1.0
2,444,714	-		Atu2476	0.25	-0.4
2,444,716	+		Atu2476	0.26	+0.2
2,444,784	-		Atu2476	0.35	-0.5
2,444,795	+		Atu2476	0.36	+0.3
2,444,814	-		Atu2476	0.38	-0.8
2,444,842	+		Atu2476	0.42	+1.4
2,444,847	+		Atu2476	0.43	+1.5
2,444,860	+		Atu2476	0.45	-0.9
2,444,868	-		Atu2476	0.46	+1.5
2,444,868	-		Atu2476	0.46	-1.3
2,444,991	-		Atu2476	0.62	+0.9
2,445,007	+		Atu2476	0.64	-1.0
2,445,190	+		Atu2476	0.88	-0.6
2,445,315	+				-0.7
2,445,321	-				+0.5
2,445,325	+				+1.4
2,445,388	+				-0.2
2,445,536	-		Atu2477	0.27	+1.7
2,445,573	+		Atu2477	0.35	-0.3
2,445,635	-		Atu2477	0.47	+0.5
2,445,651	-		Atu2477	0.51	+1.3
2,445,678	+		Atu2477	0.56	+0.5
2,445,678	+		Atu2477	0.56	+0.4
2,445,686	-		Atu2477	0.58	-1.5
2,445,801	-		Atu2477	0.81	-0.3
2,445,912	+				+0.9
2,445,920	-				+0.2
2,445,958	+				+0.4
2,445,958	+				+0.6
2,445,993	+		Atu2478	0.13	+1.1
2,446,001	-		Atu2478	0.16	-0.7
2,446,008	+		Atu2478	0.19	-1.6
2,446,035	+		Atu2478	0.30	+0.4
2,446,156	-		Atu2478	0.78	+1.1