Strain Fitness in Agrobacterium fabrum C58 around Atu2040

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,998,102	+				+0.5
1,998,192	-				-0.6
1,998,192	-				+3.0
1,998,193	-				+0.9
1,998,474	-		Atu2039	0.31	+0.0
1,999,227	-		Atu2040	0.15	-0.4
1,999,418	+		Atu2040	0.37	-1.9
1,999,427	-		Atu2040	0.38	-1.0
1,999,493	+		Atu2040	0.45	-1.2
1,999,493	+		Atu2040	0.45	-1.6
1,999,493	+		Atu2040	0.45	-0.2
1,999,501	-		Atu2040	0.46	+1.2
1,999,501	-		Atu2040	0.46	-1.1
1,999,844	+		Atu2040	0.84	+0.6
1,999,863	-		Atu2040	0.87	-1.7
1,999,899	+				-0.1
1,999,923	-				-1.9
2,000,016	+				-0.1
2,000,031	+				+0.5
2,000,211	-		Atu2041	0.41	+0.4
2,000,466	-		Atu2041	0.86	-0.5
2,000,743	+		Atu2042	0.23	-0.9
2,000,744	+		Atu2042	0.23	+0.0
2,000,817	-		Atu2042	0.33	-0.4
2,000,831	-		Atu2042	0.35	+0.0
2,000,885	-		Atu2042	0.42	-0.3