Strain Fitness in Agrobacterium fabrum C58 around Atu1676

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,662,382	+		Atu1675	0.12	+0.1
1,662,398	+		Atu1675	0.14	+0.3
1,662,460	+		Atu1675	0.19	-0.1
1,662,466	+		Atu1675	0.20	-0.6
1,662,468	-		Atu1675	0.20	-1.2
1,662,468	-		Atu1675	0.20	-2.2
1,662,468	-		Atu1675	0.20	-0.5
1,662,486	-		Atu1675	0.22	-2.2
1,662,516	-		Atu1675	0.24	+0.4
1,662,529	-		Atu1675	0.26	+0.6
1,662,529	-		Atu1675	0.26	-0.7
1,662,583	-		Atu1675	0.31	+0.0
1,662,626	+		Atu1675	0.34	-0.4
1,662,656	-		Atu1675	0.37	+1.9
1,662,701	+		Atu1675	0.41	+0.7
1,662,701	+		Atu1675	0.41	-0.1
1,662,701	+		Atu1675	0.41	-0.1
1,662,829	+		Atu1675	0.53	+1.0
1,662,846	-		Atu1675	0.54	+0.7
1,662,958	-		Atu1675	0.65	-1.8
1,663,030	-		Atu1675	0.71	-0.8
1,663,086	+		Atu1675	0.76	-0.4
1,663,086	+		Atu1675	0.76	+0.1
1,663,109	-		Atu1675	0.78	+0.7
1,663,156	+		Atu1675	0.83	-0.6
1,663,164	-		Atu1675	0.83	+0.5
1,663,207	+		Atu1675	0.87	-0.0
1,663,215	-		Atu1675	0.88	-2.0
1,663,254	-				-3.0
1,663,273	+				+2.2
1,663,479	-		Atu1676	0.12	-0.2
1,663,527	-		Atu1676	0.17	+0.0
1,663,748	+		Atu1676	0.38	-0.6
1,663,748	+		Atu1676	0.38	-3.1
1,663,770	+		Atu1676	0.41	-0.7
1,664,206	+		Atu1676	0.83	-0.5
1,664,214	-		Atu1676	0.83	-0.6
1,664,306	-				+0.6
1,664,453	-				+1.8
1,664,459	-				-0.3
1,664,548	+				-2.0
1,664,553	+				-1.8
1,664,553	+				-0.4
1,664,558	+				+1.6
1,664,561	-				-0.6
1,664,636	+				-1.0
1,664,677	+		Atu1677	0.12	-0.7
1,664,981	-		Atu1677	0.39	+0.6
1,665,043	-		Atu1677	0.44	-2.5
1,665,170	-		Atu1677	0.55	-0.7
1,665,259	+		Atu1677	0.63	-1.1