Strain Fitness in Agrobacterium fabrum C58 around Atu1627

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,612,823	-				-0.6
1,612,887	-		Atu1626	0.10	+0.6
1,612,951	+		Atu1626	0.17	-0.1
1,612,951	+		Atu1626	0.17	+0.0
1,612,957	-		Atu1626	0.18	-2.6
1,613,012	-		Atu1626	0.24	-0.5
1,613,079	+		Atu1626	0.32	+1.0
1,613,148	+		Atu1626	0.39	+0.8
1,613,156	-		Atu1626	0.40	-1.0
1,613,219	-		Atu1626	0.47	-1.0
1,613,219	-		Atu1626	0.47	+0.6
1,613,285	+		Atu1626	0.55	-0.4
1,613,350	+		Atu1626	0.62	+1.6
1,613,588	+		Atu1626	0.89	-0.7
1,613,601	-				-0.5
1,613,627	-				-0.5
1,613,639	+				+0.9
1,613,639	+				-0.1
1,613,639	+				-0.4
1,613,647	-				+2.6
1,613,688	+				-2.4
1,613,688	+				-0.7
1,613,696	-				-0.2
1,613,719	+				-0.0
1,613,747	+				+1.2
1,613,764	-		Atu1627	0.11	+0.4
1,613,764	-		Atu1627	0.11	-2.7
1,613,774	-		Atu1627	0.13	-1.7
1,613,774	-		Atu1627	0.13	-1.5
1,613,953	-		Atu1627	0.42	-0.2
1,614,012	+		Atu1627	0.52	-1.7
1,614,013	-		Atu1627	0.52	+0.3
1,614,018	-		Atu1627	0.53	+0.0
1,614,020	-		Atu1627	0.53	-0.1
1,614,054	+		Atu1627	0.59	-0.1
1,614,056	+		Atu1627	0.59	-3.1
1,614,062	-		Atu1627	0.60	-0.4
1,614,110	-		Atu1627	0.68	-1.8
1,614,112	+		Atu1627	0.68	+0.2
1,614,164	-		Atu1627	0.77	-1.1
1,614,169	-		Atu1627	0.78	-1.4
1,614,189	+		Atu1627	0.81	+1.1
1,614,381	-				+0.6
1,614,523	-		Atu1628	0.49	+1.9
1,614,525	+		Atu1628	0.50	-0.8
1,614,558	-		Atu1628	0.59	+0.8
1,614,559	+		Atu1628	0.59	-0.7
1,614,682	+				-0.5
1,614,727	+				-2.5
1,614,979	-		Atu1629	0.88	-1.2
1,615,116	-				+0.0
1,615,186	+				-1.5