Strain Fitness in Agrobacterium fabrum C58 around Atu1515

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,505,214	+				-3.0
1,505,240	+				+1.7
1,505,268	+				+0.1
1,505,347	-				+0.7
1,505,471	-		Atu1514	0.13	-0.3
1,505,506	-		Atu1514	0.17	-0.9
1,505,508	+		Atu1514	0.18	-0.4
1,505,508	-		Atu1514	0.18	+0.7
1,505,623	+		Atu1514	0.32	-0.0
1,505,672	-		Atu1514	0.38	-1.1
1,505,789	-		Atu1514	0.53	-0.9
1,505,857	+		Atu1514	0.61	-1.6
1,505,968	-		Atu1514	0.75	-0.3
1,505,976	-		Atu1514	0.76	-0.1
1,506,007	+		Atu1514	0.80	-1.7
1,506,015	-		Atu1514	0.81	-0.2
1,506,100	-				-0.1
1,506,160	+				-0.5
1,506,303	+		Atu1515	0.13	-0.8
1,506,303	+		Atu1515	0.13	-0.3
1,506,307	+		Atu1515	0.13	-0.3
1,506,372	+		Atu1515	0.20	-3.7
1,506,674	+		Atu1515	0.50	-1.1
1,506,764	+		Atu1515	0.58	+0.7
1,506,875	+		Atu1515	0.69	-0.9
1,507,171	-				-0.1
1,507,173	+				-1.8
1,507,192	-				+1.7
1,507,192	-				-0.2
1,507,402	+		Atu1516	0.12	+1.1
1,507,407	+		Atu1516	0.12	+0.5
1,507,469	-		Atu1516	0.21	+0.4
1,507,528	-		Atu1516	0.30	-0.3
1,507,550	-		Atu1516	0.33	-0.3
1,507,550	-		Atu1516	0.33	+1.1
1,507,550	-		Atu1516	0.33	+0.1
1,507,570	-		Atu1516	0.36	+0.7
1,507,577	+		Atu1516	0.37	+2.1
1,507,585	-		Atu1516	0.38	-0.7
1,507,718	-		Atu1516	0.57	+0.2
1,507,946	-				-2.0
1,508,033	+				+0.6
1,508,041	-				+0.5
1,508,068	+				-0.7
1,508,068	+				+0.6
1,508,081	-				+1.2
1,508,081	-				+0.3
1,508,081	-				+0.3
1,508,175	-		Atu1517	0.25	-0.0