Strain Fitness in Agrobacterium fabrum C58 around Atu1470
Experiment: Chloramphenicol 12.5 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 12.5 ug/mL |
---|---|---|---|---|---|
remove | |||||
1,464,329 | + | Atu1468 | 0.83 | -1.5 | |
1,464,436 | + | +0.1 | |||
1,464,464 | + | +0.1 | |||
1,464,548 | + | -1.5 | |||
1,464,872 | - | Atu1469 | 0.48 | -0.5 | |
1,464,937 | - | Atu1469 | 0.68 | -0.6 | |
1,464,962 | - | Atu1469 | 0.76 | +0.4 | |
1,465,199 | + | -0.3 | |||
1,465,424 | + | Atu1470 | 0.49 | -1.5 | |
1,465,492 | + | Atu1470 | 0.67 | -1.1 | |
1,465,600 | - | +0.3 | |||
1,465,637 | + | +0.4 | |||
1,465,637 | + | +0.0 | |||
1,465,699 | + | -2.0 | |||
1,465,699 | + | -1.3 | |||
1,465,836 | - | Atu1471 | 0.16 | -0.3 |
Or see this region's nucleotide sequence