Strain Fitness in Agrobacterium fabrum C58 around Atu1357

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,349,513	-		Atu1356	0.29	-1.5
1,349,541	+		Atu1356	0.32	-2.0
1,349,549	-		Atu1356	0.33	-0.8
1,349,728	-		Atu1356	0.49	-0.2
1,349,777	-		Atu1356	0.54	-2.3
1,349,807	-		Atu1356	0.57	-1.2
1,349,847	-		Atu1356	0.60	-0.5
1,349,854	-		Atu1356	0.61	-0.8
1,349,864	-		Atu1356	0.62	-4.5
1,349,939	+		Atu1356	0.69	+0.8
1,349,948	-		Atu1356	0.70	+0.1
1,349,976	+		Atu1356	0.72	-1.7
1,350,017	-		Atu1356	0.76	-0.7
1,350,132	-		Atu1356	0.87	+0.7
1,350,141	-		Atu1356	0.88	-0.3
1,350,216	-				-0.6
1,350,216	-				+1.3
1,350,278	+				+1.7
1,350,389	+				-1.4
1,350,389	+				+0.4
1,350,397	-				-0.2
1,350,421	+		Atu1357	0.10	-2.6
1,350,434	-		Atu1357	0.11	+2.3
1,350,529	+		Atu1357	0.17	-3.4
1,350,566	-		Atu1357	0.20	-0.7
1,350,566	-		Atu1357	0.20	-1.1
1,350,566	-		Atu1357	0.20	-2.8
1,350,696	+		Atu1357	0.29	-0.6
1,350,733	-		Atu1357	0.31	+0.7
1,350,737	+		Atu1357	0.32	-2.6
1,350,739	+		Atu1357	0.32	+0.3
1,350,740	+		Atu1357	0.32	-0.9
1,350,747	-		Atu1357	0.32	+0.3
1,350,808	+		Atu1357	0.36	-1.7
1,350,841	-		Atu1357	0.39	-1.8
1,350,867	-		Atu1357	0.40	-2.7
1,351,012	+		Atu1357	0.50	+0.9
1,351,020	-		Atu1357	0.51	-2.0
1,351,029	+		Atu1357	0.51	-0.1
1,351,101	-		Atu1357	0.56	+0.3
1,351,204	+		Atu1357	0.63	+1.0
1,351,271	+		Atu1357	0.68	-2.9
1,351,416	-		Atu1357	0.77	-2.0
1,351,442	+		Atu1357	0.79	+0.1
1,351,450	-		Atu1357	0.80	-1.1
1,351,450	-		Atu1357	0.80	+0.5
1,351,564	-		Atu1357	0.87	-1.1
1,351,580	+		Atu1357	0.89	+1.5
1,351,580	-		Atu1357	0.89	-1.7
1,351,599	-		Atu1357	0.90	-0.7
1,351,643	-				-1.8
1,351,668	+				-2.6
1,351,728	-				-4.4
1,351,764	-				-1.8
1,351,889	+				-0.9
1,352,020	+		Atu1358	0.28	+0.7
1,352,042	-		Atu1358	0.32	-0.3
1,352,110	-		Atu1358	0.45	+0.4
1,352,119	+		Atu1358	0.47	+0.1
1,352,140	-		Atu1358	0.51	-0.3
1,352,178	+		Atu1358	0.59	+0.2
1,352,186	-		Atu1358	0.60	-0.4
1,352,338	+				-0.3
1,352,380	-				-1.5
1,352,443	-				-3.0
1,352,443	-				+0.0
1,352,608	-				-1.7
1,352,615	+				-1.3