Strain Fitness in Agrobacterium fabrum C58 around Atu1189

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,180,882	-		Atu1187	0.63	+0.5
1,180,980	+		Atu1187	0.70	-0.3
1,180,988	-		Atu1187	0.71	-2.1
1,181,074	+		Atu1187	0.77	-1.5
1,181,113	-		Atu1187	0.80	+2.1
1,181,151	+		Atu1187	0.83	-0.9
1,181,159	-		Atu1187	0.83	-1.0
1,181,183	-		Atu1187	0.85	-0.9
1,181,194	+		Atu1187	0.86	-0.2
1,181,212	-		Atu1187	0.87	+0.6
1,181,217	+		Atu1187	0.87	+0.1
1,181,225	-		Atu1187	0.88	-0.7
1,181,264	+				-1.1
1,181,264	+				-0.3
1,181,385	+				-0.3
1,181,499	-				-0.8
1,181,564	-		Atu1188	0.19	+1.4
1,181,576	-		Atu1188	0.23	-1.3
1,181,618	+		Atu1188	0.35	-0.6
1,181,626	-		Atu1188	0.38	+0.9
1,181,626	-		Atu1188	0.38	+0.9
1,181,700	+		Atu1188	0.60	+0.6
1,181,708	-		Atu1188	0.62	+0.8
1,181,720	+		Atu1188	0.66	-0.7
1,181,740	+		Atu1188	0.72	-0.9
1,181,748	-		Atu1188	0.74	+0.8
1,181,760	+		Atu1188	0.78	+0.4
1,181,811	-				-0.8
1,181,892	+		Atu1189	0.19	+0.1
1,181,894	-		Atu1189	0.20	-1.8
1,182,043	+		Atu1189	0.76	-1.3
1,182,138	-				-0.0
1,182,184	+				-1.6
1,182,279	-				-0.3
1,182,318	-				-0.3
1,182,337	-				+0.0
1,182,365	-				-1.6
1,182,410	+				-1.9
1,182,421	+				+0.7
1,182,428	-				-1.8
1,182,429	-				+1.4
1,182,429	-				+0.0
1,182,434	+				+0.2
1,182,504	+				+0.9
1,182,509	+				-0.5
1,182,517	-				-1.6
1,182,592	+				+0.3
1,182,593	+				+1.3
1,182,601	-				+1.7
1,182,601	-				-1.1
1,182,813	+		Atu1190	0.17	-1.5
1,182,884	-		Atu1190	0.29	-1.6
1,182,964	-		Atu1190	0.43	-1.0
1,183,026	+		Atu1190	0.53	-1.9
1,183,087	+		Atu1190	0.64	-1.1