Strain Fitness in Agrobacterium fabrum C58 around Atu0395

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
387,325	-		Atu0394	0.31	-0.6
387,420	+		Atu0394	0.38	+0.7
387,428	-		Atu0394	0.39	+0.7
387,428	-		Atu0394	0.39	+1.8
387,455	+		Atu0394	0.41	+0.2
387,455	+		Atu0394	0.41	-0.3
387,544	-		Atu0394	0.48	+1.2
387,548	+		Atu0394	0.48	+1.5
387,579	-		Atu0394	0.51	-1.1
387,600	+		Atu0394	0.52	-0.8
387,700	-		Atu0394	0.60	-1.5
387,703	-		Atu0394	0.60	-0.6
387,714	-		Atu0394	0.61	+0.9
387,724	+		Atu0394	0.62	+1.9
387,724	+		Atu0394	0.62	-0.3
387,727	-		Atu0394	0.62	-2.5
387,732	-		Atu0394	0.62	+0.7
387,741	-		Atu0394	0.63	-0.3
387,852	-		Atu0394	0.72	+0.5
387,881	-		Atu0394	0.74	+0.9
387,947	+		Atu0394	0.79	-0.8
387,997	+		Atu0394	0.83	+0.9
388,015	+		Atu0394	0.84	+0.5
388,046	-		Atu0394	0.87	+0.9
388,144	+				+1.0
388,152	+				-1.2
388,192	+				+1.0
388,197	+				+1.3
388,197	+				+0.3
388,197	+				-0.3
388,205	-				+0.1
388,205	-				-2.0
388,205	-				-0.7
388,448	+		Atu0395	0.21	+0.5
388,455	+		Atu0395	0.21	-1.7
388,578	+		Atu0395	0.37	-1.3
388,578	+		Atu0395	0.37	-0.1
388,583	+		Atu0395	0.37	-0.3
388,583	+		Atu0395	0.37	-0.6
388,583	+		Atu0395	0.37	+0.2
388,586	-		Atu0395	0.38	-0.2
388,640	-		Atu0395	0.45	-1.7
388,684	+		Atu0395	0.50	-1.7
388,704	-		Atu0395	0.53	-1.4
388,719	+		Atu0395	0.54	+4.7
388,750	+		Atu0395	0.58	-0.2
388,823	+		Atu0395	0.67	+1.4
388,833	+		Atu0395	0.69	-0.0
388,861	-		Atu0395	0.72	+2.5
388,898	+		Atu0395	0.77	-1.3
388,910	+		Atu0395	0.78	+4.5
388,915	+		Atu0395	0.79	+1.5
388,918	-		Atu0395	0.79	+1.5
388,923	-		Atu0395	0.80	+0.3
388,945	-		Atu0395	0.83	+0.3
388,959	-		Atu0395	0.84	-1.0
388,971	-		Atu0395	0.86	-0.7
389,006	-				+1.3
389,030	-				-1.7
389,073	-				-1.1
389,083	-				-1.7
389,169	+				-0.7
389,187	-				-0.1
389,189	+				+1.0
389,196	+				-0.1
389,205	-				+0.1
389,276	+				+0.5
389,290	-				-0.6
389,331	-				+0.9
389,338	+				-0.5
389,338	+				-1.7
389,377	-				-2.2
389,413	+				-0.5
389,456	-				-2.1
389,498	+				+3.0
389,503	+				-1.5
389,511	-				-0.1
389,511	-				-0.1
389,511	-				-1.1
389,525	-				-0.8
389,544	-		Atu0396	0.11	+0.1
389,556	+		Atu0396	0.12	-1.1
389,680	+		Atu0396	0.20	-0.1
389,700	+		Atu0396	0.21	-0.8
389,736	-		Atu0396	0.24	-2.0
389,751	-		Atu0396	0.25	-0.4
389,751	-		Atu0396	0.25	-1.1
389,751	-		Atu0396	0.25	+0.7
389,865	-		Atu0396	0.32	+0.4
389,965	+		Atu0396	0.39	+0.9
389,965	+		Atu0396	0.39	+0.6
390,018	+		Atu0396	0.43	-1.3
390,026	-		Atu0396	0.43	+0.5
390,054	-		Atu0396	0.45	-1.7