Strain Fitness in Agrobacterium fabrum C58 around Atu0341
Experiment: Chloramphenicol 12.5 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 12.5 ug/mL |
---|---|---|---|---|---|
remove | |||||
331,895 | + | Atu0340 | 0.80 | +7.6 | |
331,924 | + | Atu0340 | 0.83 | +6.2 | |
332,893 | + | -0.8 | |||
333,450 | + | -0.4 | |||
333,475 | + | +0.4 | |||
333,564 | - | +2.5 | |||
333,670 | + | +0.1 | |||
333,684 | - | -0.8 | |||
333,684 | - | +0.7 | |||
333,684 | - | +3.0 | |||
333,721 | + | Atu0343 | 0.11 | +1.2 | |
333,721 | + | Atu0343 | 0.11 | +0.5 | |
333,721 | + | Atu0343 | 0.11 | -0.3 | |
333,729 | - | Atu0343 | 0.11 | -1.2 | |
333,766 | - | Atu0343 | 0.13 | +0.5 |
Or see this region's nucleotide sequence