Strain Fitness in Agrobacterium fabrum C58 around Atu0086
Experiment: Chloramphenicol 12.5 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 12.5 ug/mL |
---|---|---|---|---|---|
remove | |||||
87,339 | - | -1.2 | |||
87,365 | + | -0.8 | |||
87,382 | + | +1.4 | |||
87,437 | - | Atu0085 | 0.14 | -0.9 | |
87,442 | - | Atu0085 | 0.14 | -0.7 | |
87,452 | - | Atu0085 | 0.15 | +0.1 | |
87,465 | - | Atu0085 | 0.17 | -2.0 | |
87,609 | - | Atu0085 | 0.32 | -1.6 | |
87,751 | + | Atu0085 | 0.47 | +0.4 | |
87,832 | - | Atu0085 | 0.55 | -2.9 | |
87,862 | - | Atu0085 | 0.59 | +1.4 | |
88,213 | + | -2.2 | |||
88,221 | - | -2.0 | |||
88,221 | - | -0.3 | |||
88,221 | - | -0.6 | |||
88,221 | - | -2.0 | |||
88,456 | + | Atu0086 | 0.47 | -0.2 | |
88,625 | - | Atu0086 | 0.88 | -0.9 | |
88,768 | - | -0.2 |
Or see this region's nucleotide sequence