Strain Fitness in Agrobacterium fabrum C58 around Atu4637

Experiment: Chloramphenicol 6.25 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 6.25 ug/mL
1,787,854	-		Atu4636	0.70	+0.2
1,787,867	+		Atu4636	0.71	-0.7
1,787,880	-		Atu4636	0.71	-0.4
1,787,904	+		Atu4636	0.72	+0.3
1,787,928	-		Atu4636	0.72	-0.4
1,787,935	+		Atu4636	0.73	+0.0
1,788,004	+		Atu4636	0.75	+2.2
1,788,012	-		Atu4636	0.75	-0.0
1,788,012	-		Atu4636	0.75	-0.2
1,788,012	-		Atu4636	0.75	-0.4
1,788,100	-		Atu4636	0.78	+0.4
1,788,130	+		Atu4636	0.79	+0.2
1,788,186	-		Atu4636	0.81	+0.2
1,788,191	+		Atu4636	0.81	+0.0
1,788,356	+		Atu4636	0.86	+0.0
1,788,364	-		Atu4636	0.86	-0.7
1,788,386	+		Atu4636	0.87	-0.2
1,788,389	-		Atu4636	0.87	-0.1
1,788,394	-		Atu4636	0.87	+0.2
1,788,500	-				-0.2
1,788,505	+				+0.2
1,788,550	+				-0.2
1,788,900	+				+0.1
1,788,900	+				-0.3
1,788,910	+				+0.2
1,788,953	-		Atu4637	0.14	+0.7
1,788,972	+		Atu4637	0.15	+1.2
1,789,006	+		Atu4637	0.18	-0.1
1,789,039	+		Atu4637	0.21	+1.2
1,789,047	-		Atu4637	0.22	+0.2
1,789,052	-		Atu4637	0.22	+1.2
1,789,098	+		Atu4637	0.26	+0.2
1,789,150	-		Atu4637	0.31	-0.1
1,789,184	-		Atu4637	0.34	-0.2
1,789,285	+		Atu4637	0.42	+0.2
1,789,359	-		Atu4637	0.49	+0.7
1,789,425	-		Atu4637	0.54	-0.0
1,789,425	-		Atu4637	0.54	-1.1
1,789,462	+		Atu4637	0.58	-1.8
1,789,498	+		Atu4637	0.61	+0.4
1,789,508	+		Atu4637	0.61	+0.2
1,789,508	+		Atu4637	0.61	-0.1
1,789,508	+		Atu4637	0.61	+0.2
1,789,508	+		Atu4637	0.61	-0.1
1,789,508	+		Atu4637	0.61	+0.3
1,789,508	+		Atu4637	0.61	-1.2
1,789,508	+		Atu4637	0.61	-0.1
1,789,516	-		Atu4637	0.62	-0.0
1,789,516	-		Atu4637	0.62	-0.2
1,789,516	-		Atu4637	0.62	+0.2
1,789,516	-		Atu4637	0.62	+0.4
1,789,516	-		Atu4637	0.62	-0.6
1,789,516	-		Atu4637	0.62	+0.1
1,789,516	-		Atu4637	0.62	-0.7
1,789,516	-		Atu4637	0.62	+0.0
1,789,516	-		Atu4637	0.62	+0.2
1,789,627	+		Atu4637	0.72	-0.3
1,789,636	+		Atu4637	0.73	-0.4
1,789,690	+		Atu4637	0.77	-0.7
1,789,913	+				+0.0
1,789,931	+				+0.8
1,790,027	+				-1.2
1,790,030	-				-0.3
1,790,059	-				+1.4
1,790,061	+				-0.4
1,790,069	-				-0.8
1,790,261	+		Atu4638	0.19	+1.2
1,790,310	-		Atu4638	0.26	-0.3
1,790,320	+		Atu4638	0.28	-0.4
1,790,320	+		Atu4638	0.28	-0.6
1,790,328	-		Atu4638	0.29	-0.3
1,790,483	-		Atu4638	0.52	-0.0
1,790,483	-		Atu4638	0.52	-0.4
1,790,588	-		Atu4638	0.67	-0.1
1,790,595	+		Atu4638	0.68	-0.6
1,790,713	+		Atu4638	0.86	-0.4
1,790,721	-		Atu4638	0.87	+0.6
1,790,721	-		Atu4638	0.87	-0.3
1,790,738	-		Atu4638	0.90	-0.4
1,790,738	-		Atu4638	0.90	-0.0
1,790,810	+				+0.7
1,790,815	+				-0.4
1,790,823	-				+1.2
1,790,834	+				-0.3
1,790,910	-				+0.4