Strain Fitness in Agrobacterium fabrum C58 around Atu3100

Experiment: Chloramphenicol 6.25 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 6.25 ug/mL
106,393	+		Atu3099	0.18	-0.8
106,401	+		Atu3099	0.18	+0.1
106,409	-		Atu3099	0.19	-0.7
106,427	+		Atu3099	0.21	+0.1
106,580	-		Atu3099	0.34	+0.4
106,622	+		Atu3099	0.38	+0.8
106,630	-		Atu3099	0.39	-0.1
106,678	+		Atu3099	0.43	-1.2
106,678	+		Atu3099	0.43	-0.8
106,689	+		Atu3099	0.44	-0.0
106,817	+		Atu3099	0.55	+1.0
106,822	+		Atu3099	0.56	-0.4
106,830	-		Atu3099	0.57	+0.2
106,879	-		Atu3099	0.61	-0.2
106,952	-		Atu3099	0.67	+0.1
106,981	-		Atu3099	0.70	-0.2
107,034	+		Atu3099	0.75	-1.1
107,055	+		Atu3099	0.77	+0.7
107,125	+		Atu3099	0.83	+0.7
107,165	+		Atu3099	0.86	+0.2
107,207	-				-0.4
107,312	+				+0.1
107,337	-				+1.5
107,383	-				-0.9
107,394	-				+0.5
107,404	-				+0.5
107,446	+				-1.0
107,539	+		Atu3100	0.18	-0.4
107,600	+		Atu3100	0.25	+0.2
107,659	-		Atu3100	0.32	+1.1
107,780	-		Atu3100	0.47	+0.1
107,817	+		Atu3100	0.52	+0.5
107,859	-		Atu3100	0.57	+0.1
107,859	-		Atu3100	0.57	+0.3
107,874	+		Atu3100	0.58	-0.1
107,935	+		Atu3100	0.66	-1.1
108,089	+		Atu3100	0.84	+0.4
108,129	+		Atu3100	0.89	+0.0
108,129	+		Atu3100	0.89	+1.7
108,137	-				+0.1
108,147	+				-0.2
108,187	-				+0.2
108,215	+				+1.5
108,220	-				-0.2
108,232	-				+0.5
108,381	-		Atu3101	0.19	-0.3
108,392	+		Atu3101	0.20	+0.1
108,400	-		Atu3101	0.21	-1.8
108,445	-		Atu3101	0.26	+0.5
108,458	+		Atu3101	0.28	-0.4
108,501	+		Atu3101	0.33	-0.3
108,576	+		Atu3101	0.41	-0.1
108,576	+		Atu3101	0.41	-0.2
108,584	-		Atu3101	0.42	-1.0
108,584	-		Atu3101	0.42	+0.4
108,735	+		Atu3101	0.59	+1.8
108,750	+		Atu3101	0.61	-0.5
108,774	-		Atu3101	0.64	+0.2
108,789	+		Atu3101	0.65	-0.4
108,792	-		Atu3101	0.66	+0.3
108,893	+		Atu3101	0.77	+0.1
108,937	+		Atu3101	0.82	+0.2
108,958	+		Atu3101	0.85	-0.1
108,966	-		Atu3101	0.86	-0.7
108,966	-		Atu3101	0.86	-0.2
109,046	+				+1.2
109,094	+				-0.6
109,094	+				-0.4
109,106	+				-0.4
109,121	-				+1.0
109,143	-				-0.6
109,180	+				-2.2
109,193	+				-0.8
109,209	-				+0.0