Strain Fitness in Agrobacterium fabrum C58 around Atu2046
Experiment: Hygromycin B 25 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Hygromycin B 25 ug/mL |
---|---|---|---|---|---|
remove | |||||
2,004,345 | - | Atu2045 | 0.25 | -1.8 | |
2,004,508 | - | Atu2045 | 0.39 | -0.8 | |
2,004,696 | - | Atu2045 | 0.56 | -0.8 | |
2,004,916 | + | Atu2045 | 0.76 | +1.6 | |
2,005,262 | + | +0.1 | |||
2,005,281 | - | -1.0 | |||
2,006,694 | - | +0.5 | |||
2,006,735 | + | -0.0 | |||
2,006,743 | - | +0.7 | |||
2,006,748 | - | +1.4 | |||
2,006,784 | + | Atu8170 | 0.14 | -0.2 |
Or see this region's nucleotide sequence