Strain Fitness in Agrobacterium fabrum C58 around Atu4663

Experiment: Hygromycin B 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hygromycin B 12.5 ug/mL
1,819,747	+		Atu4662	0.17	+0.1
1,819,747	+		Atu4662	0.17	-0.4
1,819,904	-		Atu4662	0.33	-0.9
1,819,904	-		Atu4662	0.33	-0.5
1,820,184	+		Atu4662	0.61	-0.4
1,820,323	+		Atu4662	0.74	+0.1
1,820,378	-		Atu4662	0.80	-0.3
1,820,407	-		Atu4662	0.83	+0.1
1,820,470	-		Atu4662	0.89	-0.1
1,820,518	+				-0.1
1,820,575	+				-1.1
1,820,583	-				+0.3
1,820,672	+				+0.4
1,820,713	+		Atu4663	0.11	+0.2
1,820,721	-		Atu4663	0.12	+0.1
1,820,721	-		Atu4663	0.12	-0.4
1,820,925	+		Atu4663	0.30	-0.1
1,821,034	-		Atu4663	0.40	+0.5
1,821,088	+		Atu4663	0.44	+0.4
1,821,157	+		Atu4663	0.50	+0.8
1,821,165	-		Atu4663	0.51	+0.4
1,821,473	-		Atu4663	0.78	+0.5
1,821,624	-				+0.4
1,821,695	+				-0.5
1,821,715	+				-0.2
1,821,715	+				+1.4
1,821,723	-				-0.1
1,821,723	-				+0.4
1,821,742	+				-0.8
1,821,742	+				-0.0
1,821,742	+				+2.4
1,821,747	+				-0.2
1,821,854	-				-0.5
1,821,892	-				-0.0
1,821,898	-				+0.2
1,821,985	+		Atu4664	0.15	-0.1
1,821,985	+		Atu4664	0.15	+0.7
1,821,993	-		Atu4664	0.16	-0.9
1,821,993	-		Atu4664	0.16	-0.4
1,822,008	+		Atu4664	0.16	-0.4
1,822,085	+		Atu4664	0.21	-0.3
1,822,165	-		Atu4664	0.26	+0.6
1,822,313	+		Atu4664	0.35	+1.7
1,822,355	+		Atu4664	0.37	-0.2
1,822,433	+		Atu4664	0.42	-0.0
1,822,441	-		Atu4664	0.42	+0.0
1,822,478	-		Atu4664	0.45	-0.4
1,822,506	+		Atu4664	0.46	+2.4
1,822,506	-		Atu4664	0.46	-0.6
1,822,573	-		Atu4664	0.50	-0.6
1,822,676	-		Atu4664	0.57	-0.0
1,822,706	+		Atu4664	0.58	-0.6
1,822,706	+		Atu4664	0.58	-0.8
1,822,712	+		Atu4664	0.59	-0.3