Strain Fitness in Agrobacterium fabrum C58 around Atu4518

Experiment: Hygromycin B 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hygromycin B 12.5 ug/mL
1,663,611	-				-0.7
1,663,681	-				+0.1
1,663,683	+				-0.1
1,663,773	-		Atu4517	0.17	-0.2
1,663,868	+		Atu4517	0.26	-0.2
1,663,929	+		Atu4517	0.32	-0.2
1,664,031	+		Atu4517	0.43	-0.7
1,664,039	-		Atu4517	0.43	+0.2
1,664,110	+		Atu4517	0.50	-0.1
1,664,161	+		Atu4517	0.55	-0.6
1,664,169	-		Atu4517	0.56	-0.6
1,664,247	+		Atu4517	0.64	-0.1
1,664,247	+		Atu4517	0.64	+0.0
1,664,247	+		Atu4517	0.64	-0.4
1,664,247	+		Atu4517	0.64	+0.9
1,664,247	+		Atu4517	0.64	+0.0
1,664,247	+		Atu4517	0.64	+0.6
1,664,255	-		Atu4517	0.65	-0.2
1,664,255	-		Atu4517	0.65	+0.2
1,664,260	+		Atu4517	0.65	-0.1
1,664,315	-		Atu4517	0.71	+0.4
1,664,376	+		Atu4517	0.77	-0.0
1,664,411	+		Atu4517	0.80	+1.7
1,664,414	-		Atu4517	0.81	+0.3
1,664,528	-				+1.0
1,664,621	+				+0.1
1,664,699	-		Atu4518	0.10	-0.6
1,664,699	-		Atu4518	0.10	-1.4
1,664,815	-		Atu4518	0.24	-0.3
1,664,839	+		Atu4518	0.26	-0.8
1,664,852	-		Atu4518	0.28	-0.6
1,665,384	+		Atu4518	0.89	-0.3
1,665,392	-				-0.2
1,665,438	-				+1.1
1,665,457	+				-1.1
1,665,526	-				-0.1
1,665,536	-				+0.1
1,665,537	-				+0.0
1,665,558	-				-0.7
1,665,568	-				-0.2
1,665,607	+				-0.2
1,665,615	-				+0.0
1,665,644	+				+0.3
1,665,652	-				-0.2
1,665,663	+				-0.2
1,665,663	+				+0.2
1,665,663	+				-1.3
1,665,663	+				+0.4
1,665,665	+				+0.7
1,665,665	+				+0.4
1,665,670	-				-0.6
1,665,670	-				-0.1
1,665,671	-				-0.0
1,665,671	-				+0.1
1,665,671	-				-0.7
1,665,673	-				-1.3
1,665,725	+		Atu4519	0.14	+0.3
1,665,733	-		Atu4519	0.14	+0.3
1,665,839	-		Atu4519	0.23	-0.0
1,665,854	-		Atu4519	0.25	+0.3
1,665,890	+		Atu4519	0.28	-0.4
1,665,928	-		Atu4519	0.31	-0.4
1,665,972	+		Atu4519	0.35	+0.4
1,666,006	+		Atu4519	0.38	-0.3
1,666,046	+		Atu4519	0.41	-0.5
1,666,054	-		Atu4519	0.42	-1.9
1,666,302	+		Atu4519	0.63	-0.4
1,666,302	+		Atu4519	0.63	-0.0
1,666,302	+		Atu4519	0.63	-0.4
1,666,310	-		Atu4519	0.64	-0.6
1,666,310	-		Atu4519	0.64	+0.2
1,666,310	-		Atu4519	0.64	-0.7
1,666,310	-		Atu4519	0.64	-0.9
1,666,316	-		Atu4519	0.64	+0.7
1,666,371	-		Atu4519	0.69	+1.3
1,666,440	-		Atu4519	0.75	-0.6