Strain Fitness in Agrobacterium fabrum C58 around Atu4350

Experiment: Hygromycin B 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hygromycin B 12.5 ug/mL
1,483,960	+				+0.4
1,483,961	+				+1.0
1,483,982	-				+0.5
1,484,037	-				+0.2
1,484,194	+		Atu4349	0.26	-0.2
1,484,290	-		Atu4349	0.36	-0.9
1,484,293	+		Atu4349	0.36	-0.3
1,484,332	+		Atu4349	0.40	-0.4
1,484,588	+		Atu4349	0.67	-0.2
1,484,603	-		Atu4349	0.68	-0.5
1,484,669	-		Atu4349	0.75	-0.1
1,484,711	-		Atu4349	0.80	-0.5
1,484,738	+		Atu4349	0.83	-1.2
1,484,919	-				+1.3
1,485,004	-		Atu4350	0.12	+0.6
1,485,019	-		Atu4350	0.14	+0.2
1,485,053	-		Atu4350	0.18	-0.1
1,485,142	-		Atu4350	0.29	+1.9
1,485,142	-		Atu4350	0.29	-0.7
1,485,212	+		Atu4350	0.37	+0.5
1,485,220	-		Atu4350	0.38	+0.3
1,485,260	+		Atu4350	0.43	+0.5
1,485,297	+		Atu4350	0.47	+0.3
1,485,473	-		Atu4350	0.68	+1.0
1,486,435	+				-0.8
1,486,490	+		Atu4352	0.12	-1.2
1,486,568	+		Atu4352	0.38	+2.5
1,486,620	-		Atu4352	0.55	-0.7
1,486,673	-		Atu4352	0.72	-0.6
1,486,691	+		Atu4352	0.78	+1.0
1,486,695	+		Atu4352	0.79	+1.3
1,486,714	+		Atu4352	0.86	-1.0