Strain Fitness in Agrobacterium fabrum C58 around Atu2656

Experiment: Hygromycin B 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hygromycin B 12.5 ug/mL
2,637,927	-		Atu2655	0.34	+0.9
2,637,927	-		Atu2655	0.34	-0.4
2,637,927	-		Atu2655	0.34	-1.3
2,637,937	-		Atu2655	0.35	-0.8
2,637,938	-		Atu2655	0.35	-0.5
2,638,063	+		Atu2655	0.44	+0.5
2,638,445	+		Atu2655	0.70	+0.9
2,638,453	-		Atu2655	0.71	-0.5
2,638,453	-		Atu2655	0.71	-1.1
2,638,453	-		Atu2655	0.71	-0.0
2,638,453	-		Atu2655	0.71	+0.5
2,638,489	-		Atu2655	0.73	-0.5
2,638,490	-		Atu2655	0.73	-1.3
2,638,592	+		Atu2655	0.80	-0.4
2,638,639	-		Atu2655	0.84	-0.4
2,638,661	+		Atu2655	0.85	-1.6
2,638,706	+		Atu2655	0.88	-0.2
2,638,747	+				-0.6
2,638,838	+				+2.5
2,638,841	-				+0.9
2,638,957	-				-1.2
2,639,011	+				-1.1
2,639,112	+		Atu2656	0.14	+0.5
2,639,132	+		Atu2656	0.16	-0.8
2,639,132	+		Atu2656	0.16	-0.5
2,639,190	+		Atu2656	0.19	+0.5
2,639,265	-		Atu2656	0.24	-0.7
2,639,291	-		Atu2656	0.25	+0.5
2,639,347	-		Atu2656	0.29	-0.2
2,639,439	+		Atu2656	0.35	-0.5
2,639,447	-		Atu2656	0.35	+2.5
2,639,447	-		Atu2656	0.35	+0.9
2,639,447	-		Atu2656	0.35	-2.4
2,639,457	-		Atu2656	0.36	-1.2
2,639,495	+		Atu2656	0.38	-1.1
2,639,531	+		Atu2656	0.40	-2.7
2,639,567	-		Atu2656	0.43	+0.5
2,639,690	+		Atu2656	0.50	-1.5
2,639,733	+		Atu2656	0.53	-0.3
2,639,786	-		Atu2656	0.56	-2.8
2,639,831	-		Atu2656	0.59	-1.1
2,639,933	-		Atu2656	0.65	+0.9
2,639,967	-		Atu2656	0.67	+0.5
2,639,997	+		Atu2656	0.69	-1.8
2,640,018	-		Atu2656	0.70	-0.1
2,640,174	-		Atu2656	0.80	+0.2
2,640,174	-		Atu2656	0.80	+0.5
2,640,178	+		Atu2656	0.80	-0.6
2,640,232	-		Atu2656	0.84	-2.1
2,640,342	+				-0.2
2,640,350	-				-0.5
2,640,550	+				-0.6
2,640,581	+		Atu2657	0.15	+0.9
2,640,615	-		Atu2657	0.21	+0.5
2,640,719	-		Atu2657	0.43	+0.3
2,640,734	-		Atu2657	0.46	-0.6
2,641,056	+				-0.7
2,641,126	-		Atu2658	0.19	-0.6
2,641,128	+		Atu2658	0.19	+0.1
2,641,150	+		Atu2658	0.22	+0.5
2,641,328	-		Atu2658	0.46	-0.1
2,641,470	+		Atu2658	0.66	+0.2
2,641,487	+		Atu2658	0.68	+0.7