Strain Fitness in Agrobacterium fabrum C58 around Atu2537

Experiment: Hygromycin B 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hygromycin B 12.5 ug/mL
2,508,465	+				+0.5
2,508,516	-				-0.6
2,508,576	+				+0.7
2,508,607	-				+0.3
2,508,635	+				+0.6
2,508,635	+				+1.5
2,508,635	+				-1.1
2,508,640	+				+0.9
2,508,643	-				-0.5
2,508,643	-				-0.6
2,508,740	+		Atu2536	0.23	+1.5
2,508,871	+		Atu2536	0.43	+0.6
2,508,886	-		Atu2536	0.45	-0.2
2,508,917	+		Atu2536	0.50	-0.2
2,508,927	-		Atu2536	0.52	+1.5
2,508,929	+		Atu2536	0.52	+0.1
2,508,930	-		Atu2536	0.52	+0.2
2,509,038	+		Atu2536	0.69	+0.7
2,509,123	+		Atu2536	0.82	-0.4
2,509,134	+		Atu2536	0.84	+0.1
2,509,147	-		Atu2536	0.86	+0.3
2,509,282	+				-0.8
2,509,355	-				+0.2
2,509,373	-				-0.7
2,509,417	-				-0.0
2,509,438	-				+0.3
2,509,481	-		Atu2537	0.10	+1.8
2,509,539	-		Atu2537	0.19	+0.1
2,509,619	+		Atu2537	0.32	+0.0
2,509,685	+		Atu2537	0.43	+1.8
2,509,748	-		Atu2537	0.53	-0.5
2,509,754	+		Atu2537	0.54	+1.8
2,509,855	+		Atu2537	0.70	-0.1
2,509,929	-		Atu2537	0.82	-0.8
2,510,019	+				+0.1
2,510,019	+				-0.1
2,510,019	+				+0.0
2,510,024	+				-0.8
2,510,230	-				+0.1
2,510,272	+				-0.5
2,510,288	-				+0.3
2,510,288	-				+0.5
2,510,288	-				-0.1
2,510,505	+		Atu2538	0.15	+0.1
2,510,536	-		Atu2538	0.17	-0.7
2,510,540	-		Atu2538	0.17	-0.3
2,510,635	+		Atu2538	0.22	+0.7
2,510,664	+		Atu2538	0.23	-1.3
2,510,672	-		Atu2538	0.23	+0.3
2,510,766	-		Atu2538	0.28	+0.0
2,510,766	-		Atu2538	0.28	-0.3
2,510,845	-		Atu2538	0.32	-1.1
2,510,859	-		Atu2538	0.32	-0.8
2,510,889	+		Atu2538	0.34	+0.1
2,510,897	-		Atu2538	0.34	+0.2
2,510,989	-		Atu2538	0.39	+0.3