Strain Fitness in Agrobacterium fabrum C58 around Atu1083

Experiment: Hygromycin B 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hygromycin B 12.5 ug/mL
1,073,475	-				+1.0
1,073,521	+				+0.2
1,073,569	-				+0.7
1,073,607	+				+0.3
1,073,625	+				-0.1
1,073,633	-				-0.7
1,073,638	+				-0.4
1,073,760	+		Atu1082	0.27	-0.3
1,073,826	+		Atu1082	0.36	+0.5
1,073,834	-		Atu1082	0.37	+0.5
1,073,866	-		Atu1082	0.42	+0.5
1,073,959	-		Atu1082	0.55	-0.1
1,073,992	-		Atu1082	0.60	-0.6
1,074,015	-		Atu1082	0.63	+0.3
1,074,034	+		Atu1082	0.66	-0.2
1,074,109	-		Atu1082	0.76	-0.1
1,074,178	+		Atu1082	0.86	-0.4
1,074,178	+		Atu1082	0.86	-0.2
1,074,190	-		Atu1082	0.88	-0.1
1,074,237	+				+0.8
1,074,293	+				-0.5
1,074,310	-		Atu1083	0.13	+0.2
1,074,324	+		Atu1083	0.17	-0.1
1,074,370	-		Atu1083	0.32	+0.9
1,074,456	-		Atu1083	0.61	+0.4
1,074,467	+		Atu1083	0.64	+0.9
1,074,467	+		Atu1083	0.64	-0.7
1,074,641	+				-0.2
1,074,699	-				+0.3